|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Spipo20G0029600 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
|
Family |
bZIP |
Protein Properties |
Length: 379aa MW: 42103.8 Da PI: 8.6069 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Spipo20G0029600 | genome | MIPS/IBIS | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.1 | 2.4e-10 | 63 | 104 | 3 | 41 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41
+k+ +r+++NReAAr+sR++Kka+i +Le k ++Le+e
Spipo20G0029600 63 NDKVLKRLAQNREAARKSRLKKKAYIHQLEScrsKLAQLEQE 104
689**************************9722244444444 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009409 | Biological Process | response to cold |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 379 aa
Download sequence Send
to blast |
MAIYELNKHM GLWIEALGAD SSQNTATSTV LEPEPKAPPH QSQDAHEIRG SARESDQEAT 60 KPNDKVLKRL AQNREAARKS RLKKKAYIHQ LESCRSKLAQ LEQELERARK QGGATGGSPR 120 DSFLAIPRTV NSGAATFEVE YGRWVEEQNR QVRDLRAALQ AHASDVELRI LVESGMSHYD 180 ELFRMKAAAT EADVFFIISG MWKTSAERVF LWIGGFRPSA VLKVRQRSGC TQLHSWKGLA 240 LNVPYFFQVL SPQLDPLTEQ QVMAVYNLQL SSQQAEDALT QGMDKLQQTL SETLVADQPS 300 AAVTAPNCMG QMTTAMGKLE ALVSFVNQAD HLRHQALQQM HRILTTRQAA RGLLALGDYC 360 QQLRALSSVW AAQPREPA*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |