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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Spipo20G0023900 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family |
Trihelix |
Protein Properties |
Length: 223aa MW: 25206.7 Da PI: 11.0621 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Spipo20G0023900 | genome | MIPS/IBIS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 63.3 | 5.7e-20 | 24 | 107 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W ++e+ +Li+a++e++++l+rg+lk+++Weev++++ ++ g++r s +qC++k+e+l++ry+++ ++ ++ ss++ +fd+++
Spipo20G0023900 24 WLERETALLIDAYEERWSSLKRGQLKAHQWEEVASAVaAKLGLSRpskSGTQCRHKIEKLRQRYRAELQRGGS-----SSRWTFFDRID 107
99*********************************997677887666699***************99998887.....679*****998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MISQEASPAA PPPARKHNGP GKPWLERETA LLIDAYEERW SSLKRGQLKA HQWEEVASAV 60 AAKLGLSRPS KSGTQCRHKI EKLRQRYRAE LQRGGSSSRW TFFDRIDRME RGPLPISVRP 120 PPPPPPPPSP PRRSGDGGDG ESAEAEEDWG RAAMQVAAAV RRFREGLGRL QKRSLEMVIE 180 MERDWTEMET RRTEMVIESQ RRLVEAIAMA FSAKKPRRSH RS*
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