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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Spipo1G0082600 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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| Family |
SBP |
| Protein Properties |
Length: 334aa MW: 35749.2 Da PI: 8.5072 |
| Description |
SBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Spipo1G0082600 | genome | MIPS/IBIS | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SBP | 131.9 | 2.2e-41 | 91 | 168 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78
+CqvegC+ l +ak+yhrrhkvCe+hskap+v+v g+eqrfCqqCsrfh +sefD++krsCrrrLa+hnerrrk++a
Spipo1G0082600 91 RCQVEGCNLALVDAKDYHRRHKVCEIHSKAPKVVVLGIEQRFCQQCSRFHVISEFDDSKRSCRRRLAGHNERRRKSSA 168
6**************************************************************************976 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010358 | Biological Process | leaf shaping |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 334 aa
Download sequence Send
to blast |
IPFSSATSLP FSPHHHNLHT IAQAGDAHHL TCLKLGKRQY YEEGRASDPP AASGGLKRER 60
VATAVPRGSS SAAAAATASP PSSSSAMVVP RCQVEGCNLA LVDAKDYHRR HKVCEIHSKA 120
PKVVVLGIEQ RFCQQCSRFH VISEFDDSKR SCRRRLAGHN ERRRKSSAES VIRNPSPLDG 180
TAVGSGMPYL SPSNAAGHAL SLLSPKASSS WASSDLSSQS SAALRELIAE NRAAILAGQL 240
LLDRGTWHGA SPGAQVVFSI APQQQQQQPL PLTLPPQLED GWDHLRTPGA QVTLDLMQTP 300
SSSIEILSGR SRSKEGDEEC CDIWKSLEGT HVV*
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