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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Spipo13G0002700 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family |
bZIP |
Protein Properties |
Length: 336aa MW: 37499.7 Da PI: 7.9558 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Spipo13G0002700 | genome | MIPS/IBIS | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.7 | 3.4e-10 | 30 | 59 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33
k rr+++NReAAr+sR+RKka++ +Le+
Spipo13G0002700 30 AKTLRRLAQNREAARKSRLRKKAYVRQLET 59
6889************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MAGDPSRGAP PWGASHQRKF ISNDGKPLDA KTLRRLAQNR EAARKSRLRK KAYVRQLETC 60 RLKLAQMEQD LQRARSQGLF SGSGVSPGAA IFDMEYARWL DEDRKLMSEL GTGLRGQLAD 120 DDLRVVVDEC LAHHDEIFQL KAVAASSDVF HIITGMWASP AERWFLWMGG FRPSEILKML 180 IPQLDPLTEQ QLAWICSLQE SSQQAEEALS QGLEQLQQSL TDTVAGGPLN DGANVGDYMA 240 QMALALQKLS NLEGFVHQAD NLRQQTLQQM RKILTVRQAA RCFLAVGEYH ARLRSLGSLW 300 VSRPQIENSP EDALGCPATS HFHQIHPHRP PLGRF*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Chern M, et al.
Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] - Miyamoto K, et al.
Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]
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