 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Spipo12G0056500 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
|
| Family |
SBP |
| Protein Properties |
Length: 206aa MW: 22581.4 Da PI: 7.8222 |
| Description |
SBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Spipo12G0056500 | genome | MIPS/IBIS | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SBP | 72 | 1.1e-22 | 158 | 205 | 1 | 48 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48
+C+vegC+adl++ak+yhrrhkvCe hsk++vv++ g++qrfCqqCsr
Spipo12G0056500 158 QCHVEGCKADLTRAKNYHRRHKVCELHSKSAVVIIGGMHQRFCQQCSR 205
5**********************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MNSFNPTMGA YDPPRIMSFV GLESGGRVGG DRSEKQQQLW DWEPPPVHPP SETAHYYQFP 60
PFFESAAIPN ASFYDCAASS FPPLATASST TGGGCPLYSV VPGDYRGGPV KREDDWGAGG 120
IALNLGHRMY FPTSDALGVE RLFQRSTAIY QVSTHVPQCH VEGCKADLTR AKNYHRRHKV 180
CELHSKSAVV IIGGMHQRFC QQCSR*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1wj0_A | 3e-19 | 159 | 205 | 6 | 52 | squamosa promoter-binding protein-like 12 |
