|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Spipo0G0147900 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
|
Family |
WRKY |
Protein Properties |
Length: 292aa MW: 31277.9 Da PI: 5.4815 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Spipo0G0147900 | genome | MIPS/IBIS | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 74.9 | 1e-23 | 159 | 205 | 2 | 47 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTE CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkv 47
+D ++WrKYGqK++kgs+fpr+YY+C+s+ gC ++k+vers dp +
Spipo0G0147900 159 SDLWAWRKYGQKPIKGSPFPRGYYKCSSSkGCLARKQVERSPVDPAM 205
799************************998************99976 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MGDDDGWDLQ AVVKGCCGSA AASAAPAAED PSSSFPPPLI ITEMGKEEDE DWSFSFPDLC 60 AAPADLHELE ELCKPFISKT PQQQRKQQQN QKQKQKQSLS SPKGSSSSSA SAFQLSGGRW 120 AAAKPSPPQR AFLRPPASKR RKNQQKKVVC QVPADRLSSD LWAWRKYGQK PIKGSPFPRG 180 YYKCSSSKGC LARKQVERSP VDPAMEVNAA AAPRQQASKA SSSGSPPIQK EEDEEEEALH 240 IGDVEMMSED EMLFLDTGDG GAAFSDVLSE HFGAFPTPWL TSSAAAVAGG S*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | FP094710 | 9e-31 | FP094710.1 Phyllostachys edulis cDNA clone: bphyem120k20, full insert sequence. |