PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Spipo0G0078600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Araceae; Lemnoideae; Spirodela
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Family | bZIP | ||||||||
Protein Properties | Length: 429aa MW: 45398.8 Da PI: 6.7807 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 60.3 | 3.9e-19 | 243 | 305 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e e kr++rkq+NRe+ArrsR+R+++e+e L++ v+eL + N +L++e+++l e+++ +e+ Spipo0G0078600 243 EHEEKRQKRKQSNRESARRSRERRQKECEVLARQVAELNTHNADLRSEIDQLHAECKRIGTEN 305 5688****************************************************9988776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 2.0E-10 | 17 | 100 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 4.7E-17 | 239 | 300 | No hit | No description |
SMART | SM00338 | 1.6E-17 | 243 | 307 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.9E-17 | 244 | 301 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.082 | 245 | 308 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.69E-9 | 247 | 300 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 250 | 265 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence Send to blast |
MEPGGDGGVA TKPPAPANPT QRTPADSQSA SPTYPDWASA MQVFYAGGPA APGTTPPVFY 60 PSPPSLPAFV WGTQPLTFGT PVPHGSMFPH GGLGAHPAAP TGETVANGEK EVKLSQGIDS 120 GLTKPSDRGL DNCGVVAGNS GDGEKGTSGS DTCNESGGEE SSKTSREDDL SASGKGGYDQ 180 ILPVSLASSF PAASSHDGAH QWSSFCAGIG NMEKQGVLLT PPATAMNGQG KPVPEEFKGM 240 QDEHEEKRQK RKQSNRESAR RSRERRQKEC EVLARQVAEL NTHNADLRSE IDQLHAECKR 300 IGTENASITV GLSLTLRRKK ISWLVPSFLF DFVMPFALKL SDVDLPLMGE CFTLAGRTEG 360 VIWAHCVGCL GRLDSSASHL LVPNANGQKK HDPSASWSKI KGNLEPSCGI FLPQSCGKHR 420 NSIGWLFQ* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.2 | 5e-20 | G-box binding factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Spipo0G0078600 |