PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0190s0021.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | WRKY | ||||||||
Protein Properties | Length: 696aa MW: 76026.2 Da PI: 5.0362 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.9 | 1.3e-30 | 398 | 456 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dD ++WrKYGqK vk+s++pr+YYrC++++Cpv+k+ver+a+dp +v +tYeg+H+h+ Sphfalx0190s0021.1.p 398 MDDNFKWRKYGQKAVKNSPYPRNYYRCSTQNCPVRKRVERCADDPGFVLTTYEGTHTHQ 456 58********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.2E-32 | 383 | 458 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.85E-29 | 391 | 458 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.964 | 393 | 458 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.6E-36 | 398 | 457 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.7E-24 | 399 | 456 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 696 aa Download sequence Send to blast |
MEDSNGHGQE LAGQRSYMER ILRSLHAGHE DPPRESSNLL EEPSVLRGQP AAAFYTGTNT 60 CENLSSQADR YSTEQHQLSI TSGTSMWPEY CSDFSTLVEE SLELQPMMMS YDLRSIDTNN 120 ITPSRSVTAS CPASFSSFVD PLAADTIIRS HGMLLHQFQS APGLTSSGAG DDCNLIKAAG 180 EQEHELSWID FDDGLNSAMM MSQEVEAAAS THEPLPSDQM SSLVAASCDQ NMLVGKKIGR 240 NSRPDFAASH GSHETVNTRR GTSSTKQLPG TPNSDQSLSS SVSDGSADWT TNSGSTIQQQ 300 QQHKEQELQL VGCDAVDESG KTTTSQADGG AGVEKGAAAA VDEEEEEEEE EGEEDQNKTC 360 KTKKQLHSPI LRARKKGQMK RVKQPKHCIK TRTDVEIMDD NFKWRKYGQK AVKNSPYPRN 420 YYRCSTQNCP VRKRVERCAD DPGFVLTTYE GTHTHQSPAF ARLPIGAYFG AFGQPFMDPL 480 SQTAYIHSLG TSAASLLPLF AQRDLTCNPN YVGSLSSSML SHREALNSYY SRMGTIPPPS 540 IISASQQFGG GQLIDPLLVK LQHMEYNLRS ETQNSVSGTQ SEMQSPQAGP MIDFSTHPSS 600 GSQPMLQDAS PQVWEAVRAT QGQIAEAAAL QQFDDNKFIE PAKLWSSGQD FVGGRDGLLR 660 PPTTTLCRSL QSGCRTDEGL LEDMIRPALP RYGLR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 1e-23 | 389 | 459 | 8 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 1e-23 | 389 | 459 | 8 | 78 | Probable WRKY transcription factor 4 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 2e-32 | WRKY DNA-binding protein 57 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0190s0021.1.p |