PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0169s0003.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family CAMTA
Protein Properties Length: 1181aa    MW: 130891 Da    PI: 6.2703
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0169s0003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1172.65.5e-54301463117
                  CG-1   3 kekkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahse 89 
                           + ++rwl++ e+++iL n++k+ ++l   ++ rp sgs++L++rk +ryfrkDG++w+kkkdgktvrE+he+LK g+v+vl+cyYah+e
  Sphfalx0169s0003.1.p  30 EAQSRWLRPLEVCEILSNYAKYGFKLnpVPPVRPCSGSMFLFDRKTLRYFRKDGHNWRKKKDGKTVREAHERLKTGSVDVLHCYYAHGE 118
                           459******************9998866899********************************************************** PP

                  CG-1  90 enptfqrrcywlLeeelekivlvhylev 117
                           en++fqrrcyw+L+ +le+ivlvhy+ev
  Sphfalx0169s0003.1.p 119 ENSNFQRRCYWMLDAALEHIVLVHYREV 146
                           **************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143782.29224152IPR005559CG-1 DNA-binding domain
SMARTSM010765.4E-7327147IPR005559CG-1 DNA-binding domain
PfamPF038591.3E-5030145IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.7E-6575664IPR013783Immunoglobulin-like fold
CDDcd001020.0053577664No hitNo description
SuperFamilySSF812961.04E-18578664IPR014756Immunoglobulin E-set
PfamPF018331.6E-6578664IPR002909IPT domain
PfamPF127962.3E-8756838IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.208.1E-21757871IPR020683Ankyrin repeat-containing domain
CDDcd002048.06E-18760869No hitNo description
PROSITE profilePS5029719.863760881IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484033.42E-20761872IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.915810842IPR002110Ankyrin repeat
SMARTSM002482.3E-6810839IPR002110Ankyrin repeat
SuperFamilySSF525401.06E-79651046IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500966.6879771006IPR000048IQ motif, EF-hand binding site
SMARTSM000151.49951017IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.7189961025IPR000048IQ motif, EF-hand binding site
PfamPF006120.0239991016IPR000048IQ motif, EF-hand binding site
SMARTSM000151.110181040IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.40710191043IPR000048IQ motif, EF-hand binding site
PfamPF006120.02810221040IPR000048IQ motif, EF-hand binding site
SMARTSM000152310951117IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.47410971125IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1181 aa     Download sequence    Send to blast
MDGLSDNRTT RQLRTLSQQS EVDVRQILAE AQSRWLRPLE VCEILSNYAK YGFKLNPVPP  60
VRPCSGSMFL FDRKTLRYFR KDGHNWRKKK DGKTVREAHE RLKTGSVDVL HCYYAHGEEN  120
SNFQRRCYWM LDAALEHIVL VHYREVTEAS RFSMPDTHSS AASAPSSSIH VANSPDLSGP  180
SDLEHEDGDV AESDEVDDLS SLDLSGASAS FNQQQQQQQQ QPSLLEQIAP SPLHGGTIDS  240
RVFSSWSSAA PAAPFSTTTD SSPSPVGIDR LWSFPSVYST VGVPSTTYLP LQLNGQQQQQ  300
PAMNQIDNLD RSKLHESSAS TAELSSLKPP ILASTFDITV WNELLENNQR NQASSSKDPN  360
VGAMGGEAVY VKQESMNGST WAEILEQCTT PLTRQSMLEA IMGNSSLEAD GGPEAGNSHD  420
FLFGSLGPSP KGILEALSPR GLGREPQTPL EASLRAVTEQ KALRAAAEAQ QRRHVGIRTD  480
VDALWDSKAA EVGISKLKSF NNSELGNIAK FDSFGRWMSN ELGRDSQNFL PSGPSQSGWP  540
GLGMFEDQGV DDMYSLSQQM QVETELSTLV SQDQRYSIVD FSPEWAYPSG DTKVIITGMF  600
IGEYSSSSKE HKWCCMFGEL EVPAEVIGAG VLRCKAPPHA QGRVSFYVTC GDRQAHSEIR  660
EFEYCSALSA AQGLAAAKSG LRTDEEMMFK VRLSRMLLTE SNTQSTEGSA DYGRILDSVL  720
SDAEWSYLQD LAKGSGDLQV FNFQEKLLQM FLKSHMQKWL LSKLQEEGKG PSILDEKGQG  780
VFHMAAALGY DWAVAPLVAA GIPINFRDVH GWTALHWAAS YCQEEVVKAL LKAGADPGAV  840
TDPTRAFTSG QTAADLAAVN GHRGMGAFLA EINLERRLSS MTLSENPVDI AMSHIAGDNA  900
VAKLSRRESI RRTLSGEEDE PFIAESLQAV RNAARAADLI KKAFQRLSLQ KQEEDSLVSL  960
QVDEFGMTPH QLRTFMAART AQKFQNVFRG HHERKQQLAA TRIQQKYRGW KQRRDFLDLR  1020
QHVVKLQAQV RGNQVRKRLK KLLWSVGILE KAVLRWRRKG AGLRGFKSGE VSAPDKDDDN  1080
DEELIKDGRK KNEAAVEKAV TRVQSMVRSR QARAEYIRLR DGSLQQGQFS QPASPQEFQS  1140
STEEQLVSFQ HLQHQGQSLQ APSPQGYSDI MDDHLMNFPN *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024370375.10.0calmodulin-binding transcription activator 3-like
TrEMBLA0A2K1KXF30.0A0A2K1KXF3_PHYPA; Uncharacterized protein
STRINGPP1S35_152V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-128Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains