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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sphfalx0158s0012.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family |
NF-YC |
Protein Properties |
Length: 214aa MW: 24451.1 Da PI: 6.2269 |
Description |
NF-YC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sphfalx0158s0012.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YC | 173.3 | 2.5e-54 | 46 | 150 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrt 86
ql++fw++q ie++++f+nh+lPlarikki+k+dedvkmi+aeaPvl++kace+fileltlrsw+h+eenkrrtl+++dia a+tr
Sphfalx0158s0012.1.p 46 QLQTFWQQQmqeIEQVNEFRNHQLPLARIKKIMKSDEDVKMIAAEAPVLFAKACEMFILELTLRSWIHTEENKRRTLQRNDIAGAITRG 134
89*****9987889*************************************************************************** PP
NF-YC 87 difdflvdivprdelk 102
difdflvdivprdelk
Sphfalx0158s0012.1.p 135 DIFDFLVDIVPRDELK 150
*************975 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MAAHQMPTTA PGMPHPSAVI PPQYAHSQPQ QQMQPQLHYQ HLQKQQLQTF WQQQMQEIEQ 60 VNEFRNHQLP LARIKKIMKS DEDVKMIAAE APVLFAKACE MFILELTLRS WIHTEENKRR 120 TLQRNDIAGA ITRGDIFDFL VDIVPRDELK DEDLAVPWTG VPGEPVPYGN MYYPPVAGQP 180 MHHAMPPEMM VGQPALAQNP QMMYQPPQQG NMQ*
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Functional Description ? help
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Source |
Description |
UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |