PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0105s0016.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bZIP
Protein Properties Length: 467aa    MW: 51047.6 Da    PI: 4.565
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0105s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.2e-10260318361
                           XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                           + kr++r+ +NRe+A+ sR+RKk +++ Le k+  +e+  ++L+  +   + e  +l++
  Sphfalx0105s0016.1.p 260 DPKRQIRLLRNRESASQSRARKKSYVKSLELKCRMMENHVSQLQRAMTASSMENTALQQ 318
                           569***********************************999999877777666666665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.2E-12252321No hitNo description
SMARTSM003383.1E-8258322IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.22260323IPR004827Basic-leucine zipper domain
PfamPF001707.5E-8262319IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.32E-9262320No hitNo description
CDDcd147045.04E-18263313No hitNo description
PROSITE patternPS000360266280IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MEVDGVPGDF SWGEEKEEGE EIGGDDRRSF WEQALESFNA LPAVDDGAAA DCSYLEGLED  60
LVFDGETGLF LNCDSSSEGM LLGYPQNNAE EQPGHESQIL CDAGSMMAHD DDATGQTVVT  120
TSESANRLLD EWLLPGSGIG GSQALEKEEQ CFDDCVSLVP SLMQKPEIKE TNGNEFDDVS  180
ERRISTDRKR SSRRAFEETV ESLGEGESGG IESVEVNTKT AGSSSGVEMT DASDHDKGRG  240
AAVASSNVRT PTSSPEEDSD PKRQIRLLRN RESASQSRAR KKSYVKSLEL KCRMMENHVS  300
QLQRAMTASS MENTALQQEL VRVTKFKDNS FKAGVAEPAV LESNSLPLEF LPHHSYQCPM  360
GLQYRTAGHC HGWFLALVQL LLLALVRESN MSQASQAKLH EAHSSNFWHM SDSVGFEALT  420
SCSALGSSEL PSLGPRGKRR RIISSLQVFE HFKPANSLLP HVKLVF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1437441KRRRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56660.14e-11basic region/leucine zipper motif protein 49