PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Sphfalx0100s0050.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 448aa MW: 49832.3 Da PI: 8.1377 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.7 | 4.3e-12 | 308 | 362 | 5 | 59 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 k+++r NR +A+rsR RK+++i eLe v +L++e ++L +++ + a + Sphfalx0100s0050.1.p 308 KKAKRILANRQSAQRSRVRKLQYISELEMSVNALQTEVTTLSQQVGLYDHRRAIM 362 899**************************************99988877666655 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.7E-13 | 304 | 368 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.37 | 306 | 352 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.6E-10 | 308 | 359 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.7E-12 | 308 | 357 | No hit | No description |
SuperFamily | SSF57959 | 4.34E-11 | 308 | 361 | No hit | No description |
CDD | cd14703 | 1.02E-21 | 309 | 360 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 311 | 326 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 448 aa Download sequence Send to blast |
MDSLLSSSGR REGRLVDWSH PMNNNSTHLL PPKSPGGYSM FGGSSLFEGG SLFNNVHSSF 60 PIRDGSSHHH KRTPSAGYLP QVQPSWLEEI LESPDHGDMA TVNKKGLHRR ASSDSVAFSE 120 SLYNSDIMAG RFAADEERYS AQGGAPPGAH TLRIEIPDYN GLDEEQLMSV LAKMEPFERQ 180 PKQGAEGGAV MRGASVANIP LRLSPSGDNW ALERGMKHPP RRSHHGSANN MGIWEKPRTQ 240 KATNVNAENA SDSNSHSEGS NDDQRVRLRK YKSEPEVQST SEGDQSHQGQ QEDTQTSSEQ 300 IDPSLDPKKA KRILANRQSA QRSRVRKLQY ISELEMSVNA LQTEVTTLSQ QVGLYDHRRA 360 IMTAENVLLK QKLAALGQTQ RSKEAHNEAL KKELQRLLYQ QQHQLPPLSP PGYELQRQQF 420 SMLDLGSQHQ QQQQQQQPQL RPLSPIP* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_024376312.1 | 1e-114 | uncharacterized protein LOC112282640 | ||||
Refseq | XP_024376313.1 | 1e-114 | uncharacterized protein LOC112282640 | ||||
Refseq | XP_024376314.1 | 1e-114 | uncharacterized protein LOC112282640 | ||||
Refseq | XP_024376315.1 | 1e-114 | uncharacterized protein LOC112282640 | ||||
TrEMBL | A0A2K1KKF4 | 1e-113 | A0A2K1KKF4_PHYPA; Uncharacterized protein | ||||
STRING | PP1S93_157V6.1 | 1e-114 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G42380.2 | 1e-30 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Sphfalx0100s0050.1.p |