PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0092s0054.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 792aa    MW: 82861.7 Da    PI: 5.1193
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0092s0054.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-19510562156
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56 
                           ++y+GVr+++ +g+++AeIrd       + +r++lg+f+taeeAa a++ a++k++g+
  Sphfalx0092s0054.1.p 510 TRYRGVRQRP-WGKFAAEIRD----SarQGARVWLGTFDTAEEAAVAYDTAALKMRGP 562
                           68********.**********....33334**************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.03E-29510568No hitNo description
PfamPF008471.4E-13510561IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-22511569IPR016177DNA-binding domain
SMARTSM003809.4E-36511575IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.1E-31511568IPR001471AP2/ERF domain
PROSITE profilePS5103223.182511569IPR001471AP2/ERF domain
PRINTSPR003671.9E-10512523IPR001471AP2/ERF domain
PRINTSPR003671.9E-10535551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 792 aa     Download sequence    Send to blast
MNFFGGRTRS RVADGAGAGA IAAVSASAVD AAFVVGGRTS SSSGTSSGSC DRRSSSSWGS  60
SEGSGCVQIQ AAFHGRLCGV DPLEALARKA ESAVDLLQTT TSEQCGSPPC TTISGNGFQS  120
FAPESISSSC FRSKLGEPGL QLLSTQAESC GLIELKRSRP QDDLSSYGVE EALAEPRRKS  180
QKAWVIARNL RNSLGKKLFA ECLREKVGHL VKARETVELK QLQTATSTSP AAPVASSSLR  240
KDLGDDDVSL LHEIISAAAS SADQPPREEE QELDLHGSHW KLRHHRGFSS DWQLVVNDQD  300
MNLPAAASAH EDPRLEQAPA AASFDAAVYS TAASPAAASA RPSSTSSELL ASSRFELLHN  360
RAESSLCTDL PQAENRPKES IHPAVAANSE SSSWLASLGG AGFAEYASSA SFDIHHRLLQ  420
GAEDDQLLQV LKSATGADHE TTSASLQQQQ PAPRSLTYRS ARPLAFPEAT AMRLLMQRSV  480
AAAPTAAPKP QECTPASDTT PPKNPQKWRT RYRGVRQRPW GKFAAEIRDS ARQGARVWLG  540
TFDTAEEAAV AYDTAALKMR GPKARLNFLI PKTTATDSDP AAATDAGPPE TAVAPPPAHA  600
SPAVEACTDS ATDGSNNFMS SDRTAFVSAD CPETAAAIAA HAASSTGLGG ACTKVSLADA  660
SPPTGGGACT KVSLADPSSP TGGGGACTRD SALADISNSF MSLDATDFAT IAAASLSSIF  720
PESANRGLVD HDALELEDAF LAELMESTHH HDVFLSPISD HVPLSPTSNL NDICNFALFS  780
PLIMQQDCEE E*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-24512568662ATERF1
3gcc_A2e-24512568662ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.13e-18ethylene responsive element binding factor 2