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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sphfalx0091s0015.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family |
ERF |
Protein Properties |
Length: 414aa MW: 46395.4 Da PI: 8.3622 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sphfalx0091s0015.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 31.5 | 4.6e-10 | 116 | 155 | 5 | 49 |
AP2 5 GVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaa 49
GVr ++ +g++ AeIr+ ++kr++lg+f tae Aa a++ a
Sphfalx0091s0015.1.p 116 GVR-CR-NGSFTAEIRVtK----RNKRIWLGSFKTAEAAALAHDVA 155
898.55.7*********33....24**********99999999976 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
Protein Sequence Length: 414 aa
Download sequence Send
to blast |
MVDGGEASWK GSGCLQTKLK EKLKQAKDKR VGRGPDRCVH SRQVPCRQFA ASSSGSQATG 60 NPEIVSDVLP ITSVKQVVQF DLDYGLRQPF CVTDLDFLEE FSDIIAGDLR VERRIGVRCR 120 NGSFTAEIRV TKRNKRIWLG SFKTAEAAAL AHDVATFLRV TYFGAKDPTY NFDSSPSSFP 180 PFDEISHLNS DEEKFELIRK LAKNHPYAKM AKNSKDYELA IEAFNRALTE HQKQDTLKKL 240 NGSELFKSAQ YPQAVKHYSE AIKRNSTDAK AYSNREACYS KQGPFPERLK DADKCIEFDP 300 SFAKGYSPKG TIQFFMKEYD KALETYQTGL KYNDGNQGLM DGTSRCIEQI NKVTRGDISA 360 EDLEEKTGLL QLGETQVLTD LQENPKAAQE HVKNAMVMER IQKLVSAGIV QVH*
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Functional Description ? help
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Source |
Description |
UniProt | Mediates the association of the molecular chaperones HSP70 and HSP90. Mediates nuclear encoded chloroplast preproteins binding to HSP90 prior to chloroplastic sorting (By similarity). Involved in acclimation to heat. {ECO:0000250, ECO:0000269|PubMed:17085506}. |
Publications
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- Ermolaeva MD,Wu M,Eisen JA,Salzberg SL
The age of the Arabidopsis thaliana genome duplication. Plant Mol. Biol., 2003. 51(6): p. 859-66 [PMID:12777046] - Prasad BD,Goel S,Krishna P
In silico identification of carboxylate clamp type tetratricopeptide repeat proteins in Arabidopsis and rice as putative co-chaperones of Hsp90/Hsp70. PLoS ONE, 2010. 5(9): p. e12761 [PMID:20856808] - Fellerer C,Schweiger R,Schöngruber K,Soll J,Schwenkert S
Cytosolic HSP90 cochaperones HOP and FKBP interact with freshly synthesized chloroplast preproteins of Arabidopsis. Mol Plant, 2011. 4(6): p. 1133-45 [PMID:21596689] - Fernández-Bautista N,Fernández-Calvino L,Muñoz A,Castellano MM
HOP3, a member of the HOP family in Arabidopsis, interacts with BiP and plays a major role in the ER stress response. Plant Cell Environ., 2017. 40(8): p. 1341-1355 [PMID:28155228] - Fernández-Bautista N,Fernández-Calvino L,Muñoz A,Castellano MM
HOP3 a new regulator of the ER stress response in Arabidopsis with possible implications in plant development and response to biotic and abiotic stresses. Plant Signal Behav, 2017. 12(5): p. e1317421 [PMID:28426278]
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