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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0090s0026.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | ERF | ||||||||
Protein Properties | Length: 596aa MW: 63674.6 Da PI: 5.7016 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.1 | 2.2e-18 | 284 | 334 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +gr++AeIrd + r +r +lg+fgtaeeAa a+++a+++l+g Sphfalx0090s0026.1.p 284 RYRGVRHRP-WGRFAAEIRDST----RpgARLWLGTFGTAEEAAVAYDKAALRLRG 334 8*****888.**********42....356*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.62E-28 | 283 | 344 | No hit | No description |
PROSITE profile | PS51032 | 23.011 | 284 | 342 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.54E-21 | 284 | 343 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 9.9E-29 | 284 | 343 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.2E-32 | 284 | 348 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.0E-12 | 284 | 334 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.6E-9 | 285 | 296 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.6E-9 | 308 | 324 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 596 aa Download sequence Send to blast |
MREIYADSSF ALQVMQRDFI RRPVICSSDH ESLLESARSA PAAAPANESN WDMMLALAAA 60 PAGKQATDDE EEDGDDLQTS LRNGSSISPL SLEMYGDDGV FEGSQDAAAE YYESVDSRFL 120 QSGGFAKVLR EYSPRSWRVS AVGSSCSPRS KRLRVSCSTP PGLHAQLAGG ALSEGPQLAF 180 NEDDSEDMFV FSLIKNAVSN GWVPANDDPD SCPQQALPDA ASPALVRSPT RLGAAAISAR 240 NDTGPAAQVI VGTAPARIAT STSATTITGA AGGRVKQAAQ AVKRYRGVRH RPWGRFAAEI 300 RDSTRPGARL WLGTFGTAEE AAVAYDKAAL RLRGSRAHLN FPAAATASSS DELPDLISSN 360 PPAPTTTQLV ANGPLGIPTA ADHQEEYQPP PPPILQSASR SQSVAEYQNS NLLLDDGWKK 420 HMLLQLPEPQ ETAASSTIII SQPPQAPTPP PTPTPTPPRP PPSAATRSRF YSTLSLHEQA 480 IINCSNLKRS RSEYNQNDDY YSSSCNSGGR LMSTKCIDNH VQDTAPHAER SLASSPPSSP 540 TAKQQVGDSE CGAESAEPGR WSWSWSPKSC SPRAWLTQFC NIFSPILPRS PLSRF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 5e-24 | 283 | 342 | 4 | 63 | ATERF1 |
3gcc_A | 5e-24 | 283 | 342 | 4 | 63 | ATERF1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 3e-21 | ethylene responsive element binding factor 2 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0090s0026.1.p |