PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0080s0048.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | WRKY | ||||||||
Protein Properties | Length: 973aa MW: 103524 Da PI: 5.8729 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.7 | 6.4e-30 | 445 | 504 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+aed +++++tYeg+Hnh Sphfalx0080s0048.1.p 445 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVAaGCPVRKQVQRCAEDMSILITTYEGNHNHA 504 58***************************99****************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.2E-32 | 430 | 506 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.49E-27 | 438 | 506 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.172 | 440 | 506 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.9E-36 | 445 | 505 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.2E-26 | 446 | 503 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 973 aa Download sequence Send to blast |
MGSASLASIT ADGSETDTGG EWDNTETTTS SQRPATKSSS TSSAGREDRV AQIDLSVMLA 60 EDDQEMSIEE EDDEMQQVVM TTSAAAASRD CLSMIKAGLQ DSTARSSWEI DEEEASSPHR 120 APPSAGDEQQ QHQQQPAAAP VDHRASIRRW PGNENSSLFM HNTSASEDRS TVEDETSRRP 180 STTSPKQRSR GSALALQLQT ELRTAHSQMT RLSEENERLR RQLAQVVTTL NQNPNNMEVH 240 DSPADQEDLA RSRTSPKSNL RGLGKGIGKR QADENSSSPD RACVTAAPGL SGEDQVTVSS 300 PSKQQQKAAS SSPAPDEEQD GMQQVQEDNI PRSSSALSDE TRHESAPAAF NHRSSTSPPR 360 RDVDDKTGLD QSCAPTADHH QQKEEENNTR PPKKMQKTAA AAATSPSIKP VQHYNPHKEA 420 KMSEPPTVVR KARVSVRSRC ETPTMNDGCQ WRKYGQKIAK GNPCPRAYYR CTVAAGCPVR 480 KQVQRCAEDM SILITTYEGN HNHAIPPAAA AMASTTSAAA SMLLAGSTAS SCDDYHAVAA 540 RMLLQGASTS SAGGFPNNFS FATPGAAGLV QQAGGSCPTA PISGSIVAST SFPTIMLDLT 600 KEPTTQLSLQ FGSGSGPPAA TKAQSYVAHP FEAAAAASTT VAQYSARINA PVQTFPRASS 660 TQLAPLFLSN GNPNYRPTGM MQTATTTTST PDRQLEPGST ASCSSFQEHS YNTVVTRHEQ 720 PHAASAVLHQ ETVTALRTSS LAAASYNPSG SSQQLVAAGG AIDLTAPTTD QAAAAAAASK 780 SIADSISAIT ANPNFTAALA SAITSLLQSS TNNLTFQTHH HQQRQQQQQQ QQQQRASNQT 840 AAHDGSGAAP IQPQLVSYPG ELLALAPAAV QLRSTGTPPV MEFCDHSKDL YSSASSIEEE 900 EAASMLLLQQ QVAMLQQQQQ QQQQEHQESP AFTISRLLSS ALQFSMSTQE QGPQTTQLNS 960 AATMDHHPWT QN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-21 | 432 | 508 | 1 | 76 | WRKY transcription factor 1 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G04450.1 | 9e-41 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0080s0048.1.p |