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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0070s0082.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | LFY | ||||||||
Protein Properties | Length: 272aa MW: 29952.1 Da PI: 8.094 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 40.2 | 5.7e-13 | 168 | 233 | 49 | 114 |
FLO_LFY 49 r...eleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavr 114 +le +f+++Gvr tvaki+e+Gft +t+ +el l++s+ + ++ l +Ge +Gik a + Sphfalx0070s0082.1.p 168 MspiDLETFFEGFGVRPETVAKIKEMGFTGQTFTSNL-DELPSLLESIKQ--HCHLTLGEEWGIKGAAK 233 04449***************************98765.589999999998..567889*******9965 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF01698 | 8.0E-8 | 172 | 233 | IPR002910 | Floricaula/leafy protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence Send to blast |
MVKVKGVEWN HVVVLKEPEK HGMATLVRCA HCEKEFQGNA MRIRAHLLGN KRAAGVSGCP 60 SCPAEAREEL RIIDQAKSLT KRKRETRSSR TTRGTTSSAS DHSLDSAQQQ QQQHVDLMAS 120 LQNGERTTTT TTTTTTAVEH AFKSMIFQAG GLPVNFVNLS PFKPVPVMSP IDLETFFEGF 180 GVRPETVAKI KEMGFTGQTF TSNLDELPSL LESIKQHCHL TLGEEWGIKG AAKKLQKDHL 240 PVFTQPDVEK WPEPENGTAN NCKEVLCISQ S* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024369664.1 | 1e-132 | uncharacterized protein LOC112279448 | ||||
TrEMBL | A0A2K1KTT2 | 1e-132 | A0A2K1KTT2_PHYPA; Uncharacterized protein | ||||
STRING | PP1S140_156V6.1 | 1e-102 | (Physcomitrella patens) |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0070s0082.1.p |