PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0067s0103.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bZIP | ||||||||
Protein Properties | Length: 471aa MW: 52842.7 Da PI: 8.8423 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36 | 1.5e-11 | 291 | 347 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 k+++r NR +A+rsR RK+++i eLe v +L+ae ++L +++ + a l++ Sphfalx0067s0103.4.p 291 KKAKRILANRQSAQRSRVRKLQYISELEMNVNALQAEVTTLSQQVGLCDHQRAILTA 347 899**************************************9998887777766665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.0E-13 | 287 | 351 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.45 | 289 | 335 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 8.3E-12 | 291 | 345 | No hit | No description |
Pfam | PF00170 | 1.0E-9 | 291 | 342 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.78E-11 | 291 | 345 | No hit | No description |
CDD | cd14703 | 2.02E-20 | 292 | 343 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 294 | 309 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 471 aa Download sequence Send to blast |
MDSPSSGQGQ GQVVSWYHPM NNSTHLPPKS PGYSMFEGSS LFQGGSIFSE HVSFPIRGGG 60 HKRTPSAGYL PQVQPSWLEE ILESADGDVA TVKKGSHRRS SSDSAAFSES PYQLDSIVNQ 120 FTAEKEYYAQ EAPRQHILRR EISDCNRLDE QQLMPVLAKM EPFQRQPKQG AESAIIRGVS 180 VTNPARPSAS GDKTSERTMK HLPRNSIQGS ANNTVVWEKP RKQNPINIYA ENVSESNSHS 240 EGSNDDQRVS LGKYKSEPEV QSTSEGDQSY QGQQEDAQTS SEQLDLSLDP KKAKRILANR 300 QSAQRSRVRK LQYISELEMN VNALQAEVTT LSQQVGLCDH QRAILTAENV LLKQKLTSLG 360 QTQRFKEAYH EALKKEVQRL WYQQRHQRHH QLPPLSPTGY DVQQQQLPPL SPIGYELQQQ 420 QFSKLDLGSQ QQHQQLSPLS PTGYELQRQR FSKLNLGSQQ QRLPPLSPIP * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024376312.1 | 1e-114 | uncharacterized protein LOC112282640 | ||||
Refseq | XP_024376313.1 | 1e-114 | uncharacterized protein LOC112282640 | ||||
Refseq | XP_024376314.1 | 1e-114 | uncharacterized protein LOC112282640 | ||||
Refseq | XP_024376315.1 | 1e-114 | uncharacterized protein LOC112282640 | ||||
TrEMBL | A0A2K1KKF4 | 1e-113 | A0A2K1KKF4_PHYPA; Uncharacterized protein | ||||
STRING | PP1S93_157V6.1 | 1e-113 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 1e-31 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0067s0103.4.p |