PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0053s0077.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bZIP | ||||||||
Protein Properties | Length: 525aa MW: 54972.6 Da PI: 9.7493 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.1 | 5.3e-15 | 443 | 495 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v +L++eN++L+k+ + + + Sphfalx0053s0077.1.p 443 RRQRRMIKNRESAARSRARKQAYTVELEAEVNQLKEENSRLRKQQDDSAEWRK 495 79****************************************99887766555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.1E-14 | 433 | 489 | No hit | No description |
SMART | SM00338 | 2.2E-15 | 439 | 503 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.438 | 441 | 486 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.19E-10 | 443 | 488 | No hit | No description |
CDD | cd14707 | 8.77E-26 | 443 | 497 | No hit | No description |
Pfam | PF00170 | 5.7E-13 | 443 | 500 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 446 | 461 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 525 aa Download sequence Send to blast |
MGSQSLGPQQ TQARPSSSSM AASPNPPGNG SLVAAASSAL QGGGAGGGLG GSRFNSLARQ 60 SSIYSLTLDE FQNAMTEPGK NFGSMNMDEF LKNIWTAEES QAMAAAMGSS SIAAADASQA 120 AGNVDGMSML LRQPSLQLLQ GAMSLPRTLS RKTVDQVWKD IHRDSSSGGS DSGGGLPLGP 180 TSTSVQERQT TFGEMTLEDF LMKAGVVRED AADIGTSQQQ QAFSSFMGSS ALHPHGERSD 240 RINVQSGDPG DRISGATAAS GGGDIVPTLS LSPANVMPSQ ASIEAMQMDA YNKNQAATAA 300 SQQQQQVDWL RSMAQQQQQQ HFLQQQVAEA AAYANATNKR MGNGSAGPML GMAGPLGMAG 360 QMGPGAAAVM GAGLPGGMHG GGLAMGLGGL RGGAMDVNMG LAPGSPPTPD SDGMLSPMHY 420 GLDGPFRGRK RGPDGPVEKV VERRQRRMIK NRESAARSRA RKQAYTVELE AEVNQLKEEN 480 SRLRKQQDDS AEWRKKQLME MMKLASKSMA SKANVLRRTR TAMW* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024363129.1 | 1e-135 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 isoform X3 | ||||
TrEMBL | A0A4D6QI95 | 1e-155 | A0A4D6QI95_9BRYO; Abscisic acid-insensitive 5 | ||||
STRING | PP1S49_161V6.1 | 1e-115 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49720.1 | 2e-30 | abscisic acid responsive element-binding factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0053s0077.1.p |