PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0038s0122.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bZIP | ||||||||
Protein Properties | Length: 476aa MW: 51821.2 Da PI: 5.2825 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.4 | 2.7e-12 | 270 | 328 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A+rsR RK+++i eLe+ v ++++e ++ +++ ++ + a l +++ Sphfalx0038s0122.1.p 270 KRAKRILANRQSAQRSRVRKLQYISELERSVTAFQTEIATMTAQVDFYEHQRAVLNADN 328 9******************************************9999999988887765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.4E-13 | 266 | 330 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.197 | 268 | 331 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.74E-11 | 270 | 324 | No hit | No description |
Pfam | PF00170 | 1.3E-10 | 270 | 325 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.9E-12 | 270 | 324 | No hit | No description |
CDD | cd14703 | 1.33E-24 | 271 | 322 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 273 | 288 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 476 aa Download sequence Send to blast |
MASQGGQGDG WPVNNWSFPM NPSHLPPKIP AFPGFGSAQV LESTAAGHST VSLIHGGIHK 60 RTPSAGYLSQ TQSSWMDEIL DVPEGLFKPG SHRRSASESM VSLNTGYANF SNENLGEEQF 120 DSQSAALLYS HSGSLDFDRL DDDQLMSLFE DDSNSVLRQQ QHQGNKNSKP ELATNVVASV 180 STAGHSSGVN TWTLERGPTP PSKIEKLSTP SESNSPSEVS NEEAKAGGPE KLKGEPEVQS 240 TGDGDSFTQP FSKVELQQAL AGLDSTLDPK RAKRILANRQ SAQRSRVRKL QYISELERSV 300 TAFQTEIATM TAQVDFYEHQ RAVLNADNNT IKQRIATLAQ GQRFKDAYND ALKKEIQRLR 360 QLYQQQQLQQ PQQQTLPSTG YEYQQQQFSN LDLGATHQSE LNMGELNAFS GGLLQSSDEQ 420 FMFDGSCGLS PTHSHSRSLL LPHGLNAMIP ASCMLPANGS GLEGSMLGEY MVPNS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024383474.1 | 1e-131 | basic leucine zipper 61-like | ||||
Refseq | XP_024383475.1 | 1e-131 | basic leucine zipper 61-like | ||||
Refseq | XP_024383476.1 | 1e-131 | basic leucine zipper 61-like | ||||
Refseq | XP_024383477.1 | 1e-131 | basic leucine zipper 61-like | ||||
TrEMBL | A0A2K1K6T6 | 1e-130 | A0A2K1K6T6_PHYPA; Uncharacterized protein | ||||
STRING | PP1S62_67V6.1 | 1e-130 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42380.2 | 1e-41 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0038s0122.1.p |