PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0033s0087.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | WRKY | ||||||||
Protein Properties | Length: 495aa MW: 55163.1 Da PI: 9.5278 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.5 | 2e-31 | 423 | 481 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++kgs++pr+YY+C+s +Cp++k+vers edp+++++tYegeH h+ Sphfalx0033s0087.1.p 423 SDDYSWRKYGQKPIKGSPHPRGYYKCSSMrNCPARKHVERSLEDPSMLIVTYEGEHSHT 481 69************************9988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 1.5E-17 | 370 | 420 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 8.9E-33 | 411 | 481 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.528 | 417 | 483 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.81E-27 | 420 | 482 | IPR003657 | WRKY domain |
SMART | SM00774 | 8.2E-38 | 422 | 482 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.5E-27 | 424 | 480 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:1990841 | Molecular Function | promoter-specific chromatin binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence Send to blast |
MEVLEYNSSS FGKRDRDYEV QVAARVGIEN ARRLLQILSH QQRTSCSSSS SQVQCGVGKD 60 DESWRGESDA AIAGVAVSKF QKVVSLLQSR TGHARFRRAP PQINPNKAGS YEYVFFESAN 120 FAQEDELIKR KDDSKTDRAE TSRPEVFNKE FTPDRAEASR PEVFNKKFKP DKAETSRREE 180 FNFVADQLPV SDRSNGANVI PTSLNDTQQI QQQQQLQIQQ QVQQLLWQHQ QLQGVTPFGY 240 FPVLQVLPLE TVSPRKKKQQ EEEEEQQQQQ QQLEGGDSMG KPNGEKTNRN CDNNSVSSGP 300 VPLSTTTKST FSKSFSQSFS QSFSKSFSVV SMDGSAAATD SNLQQQTSSL PPNRPLPQGS 360 RDHTTGGCKK KSCSGKASDE NKAGGKSCSS LHGRCHCSKR RKLRVKRTIQ VPAISSKLAD 420 IPSDDYSWRK YGQKPIKGSP HPRGYYKCSS MRNCPARKHV ERSLEDPSML IVTYEGEHSH 480 THTPSTSTAL NVQS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-20 | 418 | 484 | 10 | 75 | WRKY transcription factor 1 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28650.1 | 1e-48 | WRKY DNA-binding protein 74 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0033s0087.1.p |