PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0030s0176.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bZIP | ||||||||
Protein Properties | Length: 459aa MW: 49210.4 Da PI: 4.991 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.9 | 3e-15 | 276 | 329 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 kr rr+ +NRe+ArrsR+RK+a + eLe +v++L eN+aL k+l ++ + Sphfalx0030s0176.1.p 276 EKRVRRMLSNRESARRSRRRKQAHLSELEMEVAQLRVENTALVKQLADISHKFN 329 599****************************************99887776655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.3E-19 | 273 | 337 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.8E-13 | 273 | 330 | No hit | No description |
PROSITE profile | PS50217 | 11.691 | 275 | 338 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.7E-13 | 277 | 327 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-11 | 277 | 326 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 280 | 295 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 1.3E-6 | 389 | 428 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence Send to blast |
MERISSVDDI LGTFWKLDPQ GEGYNNGAGG GVAVPETDAL KMVELSSGDV DKGMNRSASE 60 WAFQEFLKAH EAAGSNVPHL GHGSRSIIYE DNEEEKEEVV AAVVADAVAE SDEVSDITAS 120 HVIAGDQDVK PTSSVAEEVE VTGALNPLFS GLQGEVNGRN QMINPQEYEN FLKYKLDLAC 180 AAVALTRQLT GGGGGGSSSG SGLKQRSTAQ HSATDESSWR KPGDPLGIPA LPPKPQYGAA 240 SAVPQSQTRP ITSGSEFSDD DDHEIELSQN MNPSDEKRVR RMLSNRESAR RSRRRKQAHL 300 SELEMEVAQL RVENTALVKQ LADISHKFNK AAVDNRALKS NVEALHAKVK MAEDLLATSE 360 ARMNAPHGIM KSGGMVGEYV MGSGADAVAY VEQQPPDNSS TGVYKMGRTP SMQRVASLEH 420 LQKRSRAGGS CNMASSWASG WDFESPSLVD HHSSSNIY* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 289 | 296 | RRSRRRKQ |
2 | 291 | 296 | SRRRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 1e-40 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0030s0176.1.p |