PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0029s0016.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | WRKY | ||||||||
Protein Properties | Length: 599aa MW: 66392.9 Da PI: 5.919 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 64.5 | 1.7e-20 | 358 | 415 | 3 | 59 |
-SS-.EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 Dgyn.WrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg+ W+KYG K++ ++ f+r+YY+C+ +C++kk v+ +++dp+v++++Y g H+++ Sphfalx0029s0016.1.p 358 DGHPwWKKYGSKNIYNASFSRAYYKCSVMDCRAKKMVQPTDKDPSVFQVIYVGVHTCS 415 7775279*************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.2E-20 | 350 | 416 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-19 | 356 | 416 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.5E-21 | 356 | 416 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.9E-18 | 358 | 414 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 14.217 | 363 | 412 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 599 aa Download sequence Send to blast |
MDVLHGCLSA SVIRKIGAAE RDLVSVQCVD KVQEMLGRAI KDQQDLLDIF ESAAASSHEM 60 QQEEEARQLL DVAGSCWNTS STCTSTTSES STLLTSLTRA KLENSLDWCH LALCRLTEIF 120 GQSPAPPASA AARSVTTRQA SCRYPGRRMN DHKSQQQLEP DFFDLKFEDH LDSRLLTSNG 180 GGRSLKTKKG YQRSLDKSLN MLDSDLEPSR EETFEWIHKT VMDAELPDDN QAAARDMKIF 240 TPEIEEPSKS VIRQAAAAST APPAAARVNL SAIKDIKMQG ASAAGDDHIP QVEDRDHADQ 300 QRQINDSSFM SRRNPNIRAW KRDIQAAGSN AEEQNQAPVI LYQHLRPGEN SKKGIPEDGH 360 PWWKKYGSKN IYNASFSRAY YKCSVMDCRA KKMVQPTDKD PSVFQVIYVG VHTCSHTANT 420 RKRKRNVSRG GAVQAAADKA ANLQQFPSRE EQDHHQSPMK PTTPPMRSVL QHQTDHQPAT 480 THVATDDQGG QPEITSQLAA SAMHDFDEVE LGGLETLEDK DFFPLIKLPA PSASSSPVHH 540 HHHHELRVED RVVADNELLM GDAMSDFPPC SWLDFVSDSF GPPEITNSDM AESFQDSV* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 2e-14 | WRKY DNA-binding protein 46 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0029s0016.1.p |