PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0025s0032.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bZIP
Protein Properties Length: 334aa    MW: 37043 Da    PI: 7.7204
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0025s0032.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.87.6e-115181434
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34
                          +k  rr+++NReAAr+sR+RKka++++Le  
  Sphfalx0025s0032.1.p 51 SKTLRRLAQNREAARKSRLRKKAYVQQLESS 81
                          6889************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-74795No hitNo description
SMARTSM003383.9E-448101IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.1635094IPR004827Basic-leucine zipper domain
PfamPF001701.4E-75285IPR004827Basic-leucine zipper domain
CDDcd147084.81E-2152104No hitNo description
SuperFamilySSF579593.31E-75397No hitNo description
PROSITE patternPS0003605570IPR004827Basic-leucine zipper domain
PfamPF141442.5E-34133208IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MADNSPRTDT STDLEADAKV DNWLDDGHHH GGATGVSTMS DHEATTKNGD SKTLRRLAQN  60
REAARKSRLR KKAYVQQLES SRIKLNQIEQ ELQRARQQNL HSGGANGVST ALNPGAVAFD  120
MEYGRWVEEQ HRQMCELRAA LQAHVADNEL RLLVDGGMAH YDDVFRLKAV AAKADVFHLV  180
SGMWKTPAER CFMWMGGFRP SELLKILIPQ IEPLTEQQLL GICNLQQSSQ QAEDALSQGM  240
EALQQSLADT VMGGLLVSSP NVANYMGQMA MAMGKLGTLE SFVRQADNLR QQTLQQMHRI  300
LTTRQAARGL LAMGDYFARL RALSSLWSAR PRD*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002980439.20.0transcription factor TGA2.3 isoform X2
RefseqXP_024379754.10.0transcription factor TGA6-like isoform X2
RefseqXP_024541054.10.0transcription factor TGA2.3 isoform X1
RefseqXP_024544912.10.0transcription factor TGA2.3 isoform X2
SwissprotQ415581e-154HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
SwissprotQ6IVC31e-155TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLA0A2R6XAQ20.0A0A2R6XAQ2_MARPO; Uncharacterized protein
STRINGPP1S30_324V6.41e-179(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-150TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]