 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sphfalx0023s0151.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
|
| Family |
ERF |
| Protein Properties |
Length: 271aa MW: 30135.3 Da PI: 4.6495 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sphfalx0023s0151.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 56.9 | 5e-18 | 42 | 90 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+Wv+eIr+p +kr r++lg+f tae+Aa+a++aa +l+g
Sphfalx0023s0151.1.p 42 YRGVRMRA-WGKWVSEIREP---NKRSRIWLGSFPTAEMAARAYDAAVVALRG 90
9****998.**********9...336**********************99998 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MMMEKKKAPS LGVKKAAKGK ISGSIQKKKQ QQQSTCSNVK AYRGVRMRAW GKWVSEIREP 60
NKRSRIWLGS FPTAEMAARA YDAAVVALRG PNARLNFPDS PPTLQIHDTL SPQAIQAAAA 120
AAAASAIPPA TALQFPDQSQ ERSTSSGSSS DHEEDNNQEA DNYKMKNHNI VAVEESRTTG 180
RSELEQQQQQ QWRSPAGVEW IEEEFGEFQD FEEVDYFPEL EFSDDEVENS LLQQQPQAAA 240
AAAADHHQTD WDLGVLEDES FELSLWSLPW *
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5wx9_A | 3e-15 | 42 | 98 | 15 | 72 | Ethylene-responsive transcription factor ERF096 |
