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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sphfalx0010s0133.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family |
WRKY |
Protein Properties |
Length: 384aa MW: 42322.4 Da PI: 9.9825 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sphfalx0010s0133.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 99.3 | 2.4e-31 | 312 | 369 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver edp+++++tYegeHnh+
Sphfalx0010s0133.1.p 312 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERFLEDPSMLIVTYEGEHNHS 369
99***********************9988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 384 aa
Download sequence Send
to blast |
MEEELVGRYE PIQEAAKTGI DKVRKLVQIL TQQQQPGGPQ GQEEEEQQDA VARAAISKFQ 60 KVVSLLSRTG HARFRRVPPQ SSSSSSFAGY AFLFSDSSGG GGSAGKEDDG EEVVNKKLKS 120 LDVYLPVQSF LNTCSGHAAD AGGKSLHQAM TQQQGALDQL ERHQQHLQQH HQQQQQLQLQ 180 IQQQLHWQSQ QHQQQQQLQG TSGAMRSLAS LTNSLSSGPP LSTSSKPYSV VSMDGSSRGT 240 TDKLEQLSSL LPPHHRQQRS QLPATRKCPG KADGVKCSAL GRCHCSKRRK LRVKKTIRVP 300 AISSKQAEIP PDDYSWRKYG QKPIKGSPHP RGYYKCSSMR GCPARKHVER FLEDPSMLIV 360 TYEGEHNHSL SSSANTHTLV VHS*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1wj2_A | 3e-20 | 303 | 370 | 10 | 76 | Probable WRKY transcription factor 4 |
2lex_A | 3e-20 | 303 | 370 | 10 | 76 | Probable WRKY transcription factor 4 |