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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0007s0153.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | LFY | ||||||||
Protein Properties | Length: 315aa MW: 33661.4 Da PI: 5.0057 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 37.2 | 4.7e-12 | 99 | 204 | 41 | 155 |
FLO_LFY 41 aaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkr 129 a+++ +le +f+++Gvr t+ak++elGft +++ +el ++ s+ + + + + vGe Gik+a + ++ ee+ + Sphfalx0007s0153.1.p 99 PPPGATTAPDLELFFEGFGVRGETIAKVKELGFTSKAFTSNL-DELPSIIVSIKQ-HSCHVTVGEEQGIKCAAKHWQK---EEN-SPVS 181 3334445669*************************9987755.589999999876.6899***********9654443...322.2222 PP FLO_LFY 130 rkllsedeetaldalsqeglseepvq 155 r +s d++ + +eg s+++++ Sphfalx0007s0153.1.p 182 R--VSGDNKG-ASSSQTEGQSQQTST 204 2..3455443.233333444444333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence Send to blast |
MHIQSHLLGD KCSAGLCGSL SCPEDTMEEL RIIVDDTAES PTKRKQEEKM DGGVIKASSK 60 TNCENGTDSR LRMKGKEKIT AVEQASIGNG LLFQAKAQPP PGATTAPDLE LFFEGFGVRG 120 ETIAKVKELG FTSKAFTSNL DELPSIIVSI KQHSCHVTVG EEQGIKCAAK HWQKEENSPV 180 SRVSGDNKGA SSSQTEGQSQ QTSTGQGIPS VPAGNTHEAL FGNQRAKVPE NASTDLSRDD 240 CLAMGDLDTV KQYQELKLSS RRYNIPAKTI SGNEVVAING WVPSFGVDKD GHIESISDFD 300 APFNTSGQGS EENM* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024369664.1 | 7e-38 | uncharacterized protein LOC112279448 | ||||
TrEMBL | A9SZ72 | 4e-37 | A9SZ72_PHYPA; Predicted protein | ||||
STRING | PP1S140_156V6.1 | 2e-38 | (Physcomitrella patens) |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0007s0153.1.p |