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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sphfalx0006s0098.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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| Family |
GATA |
| Protein Properties |
Length: 239aa MW: 25699.8 Da PI: 7.6757 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sphfalx0006s0098.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 61.8 | 8.5e-20 | 67 | 101 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cgt+kTplWR+gp+g+k+LCnaCG++++k g+
Sphfalx0006s0098.1.p 67 CAHCGTSKTPLWRNGPQGPKSLCNACGIRHKKAGR 101
********************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MLESHSSYGS QLSACQSWLP DFLTSKTNPV SATAAAQAGK VQAARAVQAG GQPCLQAAEC 60
SDEVRICAHC GTSKTPLWRN GPQGPKSLCN ACGIRHKKAG RRSAATSTSS ELQQGCHSVV 120
TAGAVKGGSK RKLEEELEQQ YWIYQRDSQA PKHRGGEAFA VQPADSLQLS GTSCNMNWQR 180
SSLLPSPHQC FVHHDNSCHP SLPSIQEEDM LQMKNAFTSD EEEGAKLLMA LFYGMVYA*
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