PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0002s0318.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bZIP | ||||||||
Protein Properties | Length: 480aa MW: 53310.6 Da PI: 6.511 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.1 | 1.4e-11 | 244 | 287 | 3 | 46 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 + kr++r+ +NRe+A+ sR+RKk +++ Le ++ Le+ ++L+ Sphfalx0002s0318.1.p 244 DCKRQIRLLRNRESASQSRARKKSYVKDLEVRCRMLENHVSQLQ 287 579**********************************9988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.3E-11 | 236 | 306 | No hit | No description |
SMART | SM00338 | 3.6E-8 | 241 | 306 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.163 | 244 | 307 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.6E-9 | 245 | 302 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.41E-9 | 246 | 304 | No hit | No description |
CDD | cd14704 | 3.46E-18 | 247 | 298 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 250 | 264 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 480 aa Download sequence Send to blast |
MEVDGVPLVV ESPGEFFWGD EEEKQEDRTF WEQALASLAL PGDPDRGAAD GGYLDDFSDL 60 LGGETDLFLD CGTSEEYGGP PGVEQGRQEG YILWDGGSVA HQSTTGHEDV NCGTANRLVE 120 DWFVPQSGTG CSQEVEEDHC LDEITSSPRF VHPETKVTNA SQIEDVCERR RPSTDRKRSR 180 AAGVSLESLD TGESGGTEEV EVNFQATPSS SGEEIADASF HNKGGAVTRS NVQTPTSSPE 240 EDGDCKRQIR LLRNRESASQ SRARKKSYVK DLEVRCRMLE NHVSQLQRAM TVSAMENMAL 300 RQELVRAKKL KDSGSKSGVA EPAVLESNSL PLEFLPHHSY QCPMGHQYHT GGRCHGWLLA 360 LVQLLLLTVV RESNMLQGSP QQLHEAHSSS LFWPMSHSVG FEALTSRRAI VCSAFPNPGH 420 RRKRRRIISG LQFFEHFKAL NAPVPHVRPL FKQKRYQVKR RIKRLLPGRS GRKALHWVL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 421 | 425 | RKRRR |
2 | 422 | 426 | KRRRI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56660.1 | 2e-11 | basic region/leucine zipper motif protein 49 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0002s0318.1.p |