PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0002s0318.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bZIP
Protein Properties Length: 480aa    MW: 53310.6 Da    PI: 6.511
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0002s0318.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.11.4e-11244287346
                           XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                           + kr++r+ +NRe+A+ sR+RKk +++ Le ++  Le+  ++L+
  Sphfalx0002s0318.1.p 244 DCKRQIRLLRNRESASQSRARKKSYVKDLEVRCRMLENHVSQLQ 287
                           579**********************************9988876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-11236306No hitNo description
SMARTSM003383.6E-8241306IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.163244307IPR004827Basic-leucine zipper domain
PfamPF001704.6E-9245302IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-9246304No hitNo description
CDDcd147043.46E-18247298No hitNo description
PROSITE patternPS000360250264IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MEVDGVPLVV ESPGEFFWGD EEEKQEDRTF WEQALASLAL PGDPDRGAAD GGYLDDFSDL  60
LGGETDLFLD CGTSEEYGGP PGVEQGRQEG YILWDGGSVA HQSTTGHEDV NCGTANRLVE  120
DWFVPQSGTG CSQEVEEDHC LDEITSSPRF VHPETKVTNA SQIEDVCERR RPSTDRKRSR  180
AAGVSLESLD TGESGGTEEV EVNFQATPSS SGEEIADASF HNKGGAVTRS NVQTPTSSPE  240
EDGDCKRQIR LLRNRESASQ SRARKKSYVK DLEVRCRMLE NHVSQLQRAM TVSAMENMAL  300
RQELVRAKKL KDSGSKSGVA EPAVLESNSL PLEFLPHHSY QCPMGHQYHT GGRCHGWLLA  360
LVQLLLLTVV RESNMLQGSP QQLHEAHSSS LFWPMSHSVG FEALTSRRAI VCSAFPNPGH  420
RRKRRRIISG LQFFEHFKAL NAPVPHVRPL FKQKRYQVKR RIKRLLPGRS GRKALHWVL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1421425RKRRR
2422426KRRRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56660.12e-11basic region/leucine zipper motif protein 49