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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0000s0634.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | CAMTA | ||||||||
Protein Properties | Length: 824aa MW: 93133.3 Da PI: 6.1899 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 143.2 | 7.4e-45 | 48 | 160 | 5 | 117 |
CG-1 5 kkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 +rwl++ e+++iL n+ k+ ++l ++ +p sgs++L++rk +ryfrkDG++w+kkkd ktvr +h LK g+v l+cyYa +e+n Sphfalx0000s0634.1.p 48 LSRWLRPLEVCEILSNYGKYGFKLnpVPPVKPCSGSMFLFDRKTLRYFRKDGHNWRKKKDSKTVRQAHDLLKTGSV--LHCYYADGEDN 134 68*****************9998866899*******************************************9985..99********* PP CG-1 92 ptfqrrcywlLeeelekivlvhylev 117 + fqrrcyw+L+ +le+ivlvhy+ev Sphfalx0000s0634.1.p 135 SCFQRRCYWMLDPALEHIVLVHYREV 160 ************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 69.29 | 40 | 166 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 3.4E-58 | 43 | 161 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 2.2E-42 | 49 | 159 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM00220 | 1.2E-51 | 547 | 815 | IPR000719 | Protein kinase domain |
PROSITE profile | PS50011 | 35.594 | 547 | 815 | IPR000719 | Protein kinase domain |
SuperFamily | SSF56112 | 1.89E-62 | 549 | 813 | IPR011009 | Protein kinase-like domain |
Gene3D | G3DSA:3.30.200.20 | 9.8E-27 | 549 | 652 | No hit | No description |
Pfam | PF07714 | 7.2E-47 | 550 | 810 | IPR001245 | Serine-threonine/tyrosine-protein kinase catalytic domain |
PROSITE pattern | PS00107 | 0 | 553 | 574 | IPR017441 | Protein kinase, ATP binding site |
Gene3D | G3DSA:1.10.510.10 | 2.1E-34 | 653 | 809 | No hit | No description |
PROSITE pattern | PS00108 | 0 | 662 | 674 | IPR008271 | Serine/threonine-protein kinase, active site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 824 aa Download sequence Send to blast |
MTPPRRRRGY IMKGASENRA LLRVVTAAAH RQRQQAEVDI RQILEDALSR WLRPLEVCEI 60 LSNYGKYGFK LNPVPPVKPC SGSMFLFDRK TLRYFRKDGH NWRKKKDSKT VRQAHDLLKT 120 GSVLHCYYAD GEDNSCFQRR CYWMLDPALE HIVLVHYREV TESSRFSTMA ADTATTTTTH 180 SSSSPSPSSV AVAGSPDVSG VGPSDQEHED GDVVESDEVE DSSGIGPLQQ QDDWPNLKSI 240 QRPLDMGSLE VSNRNFAGST SEELTIQVLQ QRAPQQGCSF MELMNHGINE SQDYYLKTTT 300 QGQVEGMFYE PEDTSSGDQS ESNTVFQLEY ATDIFTFQAT SLNPANTQVF KERTLTAIYD 360 LDDRTFGQNS ELQVNVLQCK HMVNTILASK CYLMEQTCTS SADPIFKELF RIVKKADLIV 420 QECSDEPLKL KSLLAQMDNV HAFVDVTVDW RWCTRLFRND VEDCTWASVH STFEQLKQQD 480 LMQNKKLWDA HIAELQKQSM STTGDPRMGE RSNLADYLQG RVQNVMHASD KPEGLPRCFV 540 WASDPEAKRG EFLGTGTFGS VSEYTWFGLE CAKKSFNPFL CEKQERDFEN EVGVMVRLNH 600 PHVVQLICCC QDSTKPSILM ELMPTNLERY IRGRKYPFTP LAAVDVMSQI ASGMEYLHEQ 660 GVVHRDLKPN NILVCPNTNP ELSADGYVEV KLADFGLAKT KVYTSASILS SQICGAAPWR 720 PPEAFGERFS AKRADVYSFA IMCAQILSCN VHPFGDPPTR VRERISSPQH ERPSLPSNNN 780 YPAELLSLIK ECWAPDSQKR PNFSTICKRL QETRLGLLVC NRM* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3zfx_A | 1e-27 | 551 | 812 | 25 | 282 | EPHRIN TYPE-B RECEPTOR 1 |
3zfx_B | 1e-27 | 551 | 812 | 25 | 282 | EPHRIN TYPE-B RECEPTOR 1 |
3zfx_C | 1e-27 | 551 | 812 | 25 | 282 | EPHRIN TYPE-B RECEPTOR 1 |
3zfx_D | 1e-27 | 551 | 812 | 25 | 282 | EPHRIN TYPE-B RECEPTOR 1 |
3zfx_E | 1e-27 | 551 | 812 | 25 | 282 | EPHRIN TYPE-B RECEPTOR 1 |
3zfx_F | 1e-27 | 551 | 812 | 25 | 282 | EPHRIN TYPE-B RECEPTOR 1 |
3zfx_G | 1e-27 | 551 | 812 | 25 | 282 | EPHRIN TYPE-B RECEPTOR 1 |
3zfx_H | 1e-27 | 551 | 812 | 25 | 282 | EPHRIN TYPE-B RECEPTOR 1 |
3zfx_I | 1e-27 | 551 | 812 | 25 | 282 | EPHRIN TYPE-B RECEPTOR 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 1e-48 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0000s0634.1.p |