PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sp_204710_rzws.t1 | ||||||||
Common Name | SOVF_204710 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family | bZIP | ||||||||
Protein Properties | Length: 471aa MW: 51681.2 Da PI: 7.977 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.5 | 9.4e-11 | 376 | 434 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr +r NR +A rs +RK ++ eLe kv++L++e ++L +l +l+ +a l++++ Sp_204710_rzws.t1 376 KRVKRILANRQSAARSKERKMRYMSELEHKVQTLQTEATTLSAQLTHLQRDSAGLTNQN 434 899************************************************99999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.2E-19 | 372 | 436 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.967 | 374 | 437 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-9 | 376 | 434 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.7E-12 | 376 | 432 | No hit | No description |
SuperFamily | SSF57959 | 2.01E-11 | 376 | 427 | No hit | No description |
CDD | cd14703 | 2.70E-24 | 377 | 428 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 471 aa Download sequence Send to blast |
MEGSDETGVM QRIQSSFGNC SSSVYKQSVN QLGINGQMQN LSVLEGSNHN VNSKRPSGIP 60 PSHPHSHFVA PKIVPQQVVV TQNFNTGPTH SRSLSQSSFF SFDNLPPLSP SVFKESGSPI 120 SGSNEVPLQE RDGGFRGGSG FHVNEGLPPP PRKGHRRSSS DVPLGFVSTG QTSGSQFMAK 180 EKEREKPAQL VLKRESDWGG TRNASGEGEA ERKSEGEVVD DLFSAYMNLD NLDALNSSSM 240 DDKDMDSRAS GTRTNDSSEN EVESSTAGNS HGIHGDTSRA VKRGKRSAPG DIVPTGRHFR 300 SLSMDSFMGS LNFNDDSPKL PPSPGIHSAQ HSPSNSFDEN TNQFSLEFAN SDFTPVELKK 360 IMLNEKLAEL AMSDPKRVKR ILANRQSAAR SKERKMRYMS ELEHKVQTLQ TEATTLSAQL 420 THLQRDSAGL TNQNNELRFR LQSMEQQAQL KDGKLFSRVI LYISSVIMHR S |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021864082.1 | 0.0 | transcription factor VIP1-like | ||||
TrEMBL | A0A0K9QB30 | 0.0 | A0A0K9QB30_SPIOL; Uncharacterized protein | ||||
STRING | XP_010670890.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-105 | bZIP family protein |