PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_204710_rzws.t1
Common NameSOVF_204710
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 471aa    MW: 51681.2 Da    PI: 7.977
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_204710_rzws.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.59.4e-11376434563
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        kr +r   NR +A rs +RK  ++ eLe kv++L++e ++L  +l +l+  +a l++++
  Sp_204710_rzws.t1 376 KRVKRILANRQSAARSKERKMRYMSELEHKVQTLQTEATTLSAQLTHLQRDSAGLTNQN 434
                        899************************************************99999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-19372436IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.967374437IPR004827Basic-leucine zipper domain
PfamPF001703.3E-9376434IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.7E-12376432No hitNo description
SuperFamilySSF579592.01E-11376427No hitNo description
CDDcd147032.70E-24377428No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MEGSDETGVM QRIQSSFGNC SSSVYKQSVN QLGINGQMQN LSVLEGSNHN VNSKRPSGIP  60
PSHPHSHFVA PKIVPQQVVV TQNFNTGPTH SRSLSQSSFF SFDNLPPLSP SVFKESGSPI  120
SGSNEVPLQE RDGGFRGGSG FHVNEGLPPP PRKGHRRSSS DVPLGFVSTG QTSGSQFMAK  180
EKEREKPAQL VLKRESDWGG TRNASGEGEA ERKSEGEVVD DLFSAYMNLD NLDALNSSSM  240
DDKDMDSRAS GTRTNDSSEN EVESSTAGNS HGIHGDTSRA VKRGKRSAPG DIVPTGRHFR  300
SLSMDSFMGS LNFNDDSPKL PPSPGIHSAQ HSPSNSFDEN TNQFSLEFAN SDFTPVELKK  360
IMLNEKLAEL AMSDPKRVKR ILANRQSAAR SKERKMRYMS ELEHKVQTLQ TEATTLSAQL  420
THLQRDSAGL TNQNNELRFR LQSMEQQAQL KDGKLFSRVI LYISSVIMHR S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021864082.10.0transcription factor VIP1-like
TrEMBLA0A0K9QB300.0A0A0K9QB30_SPIOL; Uncharacterized protein
STRINGXP_010670890.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-105bZIP family protein