PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_193430_xucf.t1
Common NameSOVF_193430
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 712aa    MW: 77867 Da    PI: 5.9876
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_193430_xucf.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1461.1e-14244302361
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                        ++k+  r+++NRe+A+ sRqRKk+++eeLe+kv ++ +  ++L  +++ +  e a+l+ 
  Sp_193430_xucf.t1 244 DDKKKARLMRNRESAQLSRQRKKQYVEELEDKVRAMHSTITDLNGKISYMMAENASLRH 302
                        689*****************************************999999999999876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.7E-16242306IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.323244304IPR004827Basic-leucine zipper domain
PfamPF001701.9E-12245303IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.19E-13246304No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-16246304No hitNo description
CDDcd147041.06E-21247298No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042538Biological Processhyperosmotic salinity response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 712 aa     Download sequence    Send to blast
MEDPIPYDPN PSPLPIPPLD NAHLHSTDFF PENFSIDADG YGGEDDDFNF GVDFDFTFDD  60
LCFADDLLSD PQVPEIPNSD VSDALENPNS GDSEIIGNPA PRVYDCSSPE VNPGPISSEE  120
SNFGVKLSCA SPESGSCKSN SAVSQTFRGD SGNNSDRDVS SSSFVDNNDD LSPNSQIKVE  180
EIVGKSNHNV NNTNKKNGVP KRKKEHEYEH EQVEERSSEG RLNKFRRSSM SENMSIDLEG  240
VDGDDKKKAR LMRNRESAQL SRQRKKQYVE ELEDKVRAMH STITDLNGKI SYMMAENASL  300
RHQLVGGGMC AAPPPPHGMY PMAPMPYPWM ACPPYMVKQQ GSHVPLVPIP RLKPQQPAPA  360
PKVNRRSESK KSEGKTKKVA SVSLLGLLFC MLLFGGLVPL VNVKYGGLGI GFDGVQKGSV  420
FMVDKHMESK ISSHGRILKQ TNSSDRLGPN GNSSEPLVAS LYVPRNDKLV KIDGNLIIHS  480
VLASEKAKAK QTAEGIKTSE ETGLAIHGSY PPYPIPGPGS NDWRHPHLDR NQNGRQRALS  540
SSSSEEFTPA GSDGKLQEWF REGLAGPMLS SGMCTEVFQF DISPTPGAIV PATSIVNITS  600
ERRQNSTRPN RSRNRRILHE HAIPLDGNTL NATEDHVQHE HSDGLQGNKS SSSMVVSVLV  660
DPREIGDGDG EGVIRSKTMS RIFVVVLIDS VKYVTYSCML PFMGSGNHLV TT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1602615RQNSTRPNRSRNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021840232.10.0bZIP transcription factor 17-like
TrEMBLA0A0K9QEM40.0A0A0K9QEM4_SPIOL; Uncharacterized protein
STRINGXP_010673077.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-110bZIP family protein