PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sp_193430_xucf.t1 | ||||||||
Common Name | SOVF_193430 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family | bZIP | ||||||||
Protein Properties | Length: 712aa MW: 77867 Da PI: 5.9876 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46 | 1.1e-14 | 244 | 302 | 3 | 61 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++k+ r+++NRe+A+ sRqRKk+++eeLe+kv ++ + ++L +++ + e a+l+ Sp_193430_xucf.t1 244 DDKKKARLMRNRESAQLSRQRKKQYVEELEDKVRAMHSTITDLNGKISYMMAENASLRH 302 689*****************************************999999999999876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.7E-16 | 242 | 306 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.323 | 244 | 304 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-12 | 245 | 303 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.19E-13 | 246 | 304 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-16 | 246 | 304 | No hit | No description |
CDD | cd14704 | 1.06E-21 | 247 | 298 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 712 aa Download sequence Send to blast |
MEDPIPYDPN PSPLPIPPLD NAHLHSTDFF PENFSIDADG YGGEDDDFNF GVDFDFTFDD 60 LCFADDLLSD PQVPEIPNSD VSDALENPNS GDSEIIGNPA PRVYDCSSPE VNPGPISSEE 120 SNFGVKLSCA SPESGSCKSN SAVSQTFRGD SGNNSDRDVS SSSFVDNNDD LSPNSQIKVE 180 EIVGKSNHNV NNTNKKNGVP KRKKEHEYEH EQVEERSSEG RLNKFRRSSM SENMSIDLEG 240 VDGDDKKKAR LMRNRESAQL SRQRKKQYVE ELEDKVRAMH STITDLNGKI SYMMAENASL 300 RHQLVGGGMC AAPPPPHGMY PMAPMPYPWM ACPPYMVKQQ GSHVPLVPIP RLKPQQPAPA 360 PKVNRRSESK KSEGKTKKVA SVSLLGLLFC MLLFGGLVPL VNVKYGGLGI GFDGVQKGSV 420 FMVDKHMESK ISSHGRILKQ TNSSDRLGPN GNSSEPLVAS LYVPRNDKLV KIDGNLIIHS 480 VLASEKAKAK QTAEGIKTSE ETGLAIHGSY PPYPIPGPGS NDWRHPHLDR NQNGRQRALS 540 SSSSEEFTPA GSDGKLQEWF REGLAGPMLS SGMCTEVFQF DISPTPGAIV PATSIVNITS 600 ERRQNSTRPN RSRNRRILHE HAIPLDGNTL NATEDHVQHE HSDGLQGNKS SSSMVVSVLV 660 DPREIGDGDG EGVIRSKTMS RIFVVVLIDS VKYVTYSCML PFMGSGNHLV TT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 602 | 615 | RQNSTRPNRSRNRR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021840232.1 | 0.0 | bZIP transcription factor 17-like | ||||
TrEMBL | A0A0K9QEM4 | 0.0 | A0A0K9QEM4_SPIOL; Uncharacterized protein | ||||
STRING | XP_010673077.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40950.1 | 1e-110 | bZIP family protein |