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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_188050_cydp.t1 |
Common Name | SOVF_188050 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
bZIP |
Protein Properties |
Length: 156aa MW: 17504 Da PI: 4.2681 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_188050_cydp.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 46.9 | 6.1e-15 | 1 | 54 | 10 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
+q+NRe+ArrsR+RK+ ++ L+ v+eL+a+N++ +++ ++ ++++ ++++e+
Sp_188050_cydp.t1 1 MQSNRESARRSRLRKQNHLDDLAVQVAELKAQNSRIISTTNTSTQLYLEVEAEN 54
79********************************************99998887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 156 aa
Download sequence Send
to blast |
MQSNRESARR SRLRKQNHLD DLAVQVAELK AQNSRIISTT NTSTQLYLEV EAENSVLRAQ 60 LSELSNRLQS LNDIINCLSN NNVHGNINNN NNNNNNNNVM RITTSTTSDG CSSDDQEISL 120 IGSFDVDLEF DDDFSMNSWG FSFANYPTTT PDAFMC
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 8 | 14 | RRSRLRK |
2 | 8 | 15 | RRSRLRKQ |