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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_187760_muof.t2 |
Common Name | SOVF_187760 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
bZIP |
Protein Properties |
Length: 395aa MW: 42958.4 Da PI: 6.1942 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_187760_muof.t2 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.2 | 9.5e-10 | 182 | 229 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52
kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l +
Sp_187760_muof.t2 182 KRAKRILANRQSAARSKERKARYILELERKVQTLQTEATTLSAQLTLY 229
9****************************************9888665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MAMKPDPSTS NPNPDINGNP TKPLSAIPIS NGIGIGNGNA NSTLFGNPTP NPFRGPHHRR 60 AHSEVSFRIH DDMDLSSDPF TGSSTEEIGS EDDLFTTYID VDKLGAASGS ASHPSDDFAT 120 ASADGANVGL GLAVDGGDGG RPRHRYSNSV DATSSASFGE IMDAKKAMPP DKLAELWTID 180 PKRAKRILAN RQSAARSKER KARYILELER KVQTLQTEAT TLSAQLTLYQ RDTTGLSSEN 240 TELKLRLQAM EQQAQLRDGE SHALFNYNHG WDHNLALNEA LKQEVERLRM ATGEMMGPSE 300 SFNLGMPSMQ YNHSAFYSLP PQHVSQGQHN MQMPQFHQSQ GNMHHMHSSN PQNPSEFMPN 360 DPLGRLQGLD ISSRGAPTVK SEGASMSASE SSSTF
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Functional Description ? help
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Source |
Description |
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Pawar V, et al.
A novel family of plant nuclear envelope-associated proteins. J. Exp. Bot., 2016. 67(19): p. 5699-5710 [PMID:27630107] - Gibalová A, et al.
Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] - Ezer D, et al.
The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] - Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
Efficient gene tagging in Arabidopsis thaliana using a gene trap approach. Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7 [PMID:9356517]
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