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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_172520_tiqt.t1 |
Common Name | SOVF_172520 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
WRKY |
Protein Properties |
Length: 213aa MW: 24604 Da PI: 8.9506 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_172520_tiqt.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.3 | 5.5e-32 | 134 | 192 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tY g H h+
Sp_172520_tiqt.t1 134 LDDGYRWRKYGQKAVKNNKFPRSYYRCTYQGCNVKKQVQRLSNDEGVVVTTYDGIHSHS 192
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000122 | Biological Process | negative regulation of transcription from RNA polymerase II promoter |
GO:0010055 | Biological Process | atrichoblast differentiation |
GO:0032107 | Biological Process | regulation of response to nutrient levels |
GO:0043620 | Biological Process | regulation of DNA-templated transcription in response to stress |
GO:0048527 | Biological Process | lateral root development |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MEAYSIFSSS TNSSTSSPTN NSNFPFSLSQ VSSSSNSFDH NKMDQSYHHL SQRIPPPMVV 60 VQAHELMSNH NYHDIITPLN NHHQDNDDDQ KKRIIMDNDD NSNSNSASNK KGSLEKKAKK 120 HRFAFQTRSQ VDILDDGYRW RKYGQKAVKN NKFPRSYYRC TYQGCNVKKQ VQRLSNDEGV 180 VVTTYDGIHS HSIERSTDNF EHILTQMQIY NSF
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