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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_166080_roit.t1 |
Common Name | SOVF_166080 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
WRKY |
Protein Properties |
Length: 437aa MW: 48049.6 Da PI: 7.2247 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_166080_roit.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95.6 | 3.4e-30 | 47 | 103 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKYGqK+vkg+e+ rsYY+C++++C+vkk+vers d+++++itY g+H+h
Sp_166080_roit.t1 47 EDGYNWRKYGQKNVKGNEYIRSYYKCSHPNCQVKKQVERSL-DGRITDITYLGKHDHA 103
7****************************************.***************7 PP
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2 | WRKY | 105.9 | 2e-33 | 222 | 280 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK+vkg+++prsYYrC+++gCpvkk+ver+++d kvv++tYegeH+h+
Sp_166080_roit.t1 222 VNDGYRWRKYGQKMVKGNPNPRSYYRCSTTGCPVKKHVERASHDLKVVITTYEGEHDHS 280
58********************************************************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 437 aa
Download sequence Send
to blast |
MGTQEENAVI VTPKDALEQR LSPDSTIHAS SIDREGNASI VPEKPSEDGY NWRKYGQKNV 60 KGNEYIRSYY KCSHPNCQVK KQVERSLDGR ITDITYLGKH DHAKPHSDPL ATVPSLLSVK 120 LQIPDCPQPP VDEDKPSDAH ALTIVTTDHV KKMEVCRYAI VKMADDSTPV SLTPSSQARD 180 DHSENFTLKR RKRGTDGVDS STEKTNHESR IIVHTVSEVD IVNDGYRWRK YGQKMVKGNP 240 NPRSYYRCST TGCPVKKHVE RASHDLKVVI TTYEGEHDHS MPPIRTIVPQ TAAGSAGGTE 300 SNGMSKSKSE ESDAAQDGAI IGKPEKGDST TKEEESKSAI VARTENPLTK AERTDHIPPT 360 AKEEIGQTAK QEKVSTVNVV LKPEVVPTKE QKPGAISDMK PEVVLSEGKR ADTIVESSRA 420 EAKSNGLQRP NAEAVNC
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Binds to a 5'-CGTTGACCGAG-3' consensus core sequence which contains a W box, a frequently occurring elicitor-responsive cis-acting element. {ECO:0000269|PubMed:8972846}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid (SA). {ECO:0000269|PubMed:17264121}. |