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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sp_134920_hygk.t1 |
| Common Name | SOVF_134920 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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| Family |
NAC |
| Protein Properties |
Length: 364aa MW: 42229.2 Da PI: 6.3433 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sp_134920_hygk.t1 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 177.2 | 4.3e-55 | 7 | 135 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkd 89
+ppGfrFhPtdeelv++yL++k++++k+ ++ik+vd+yk+ePwdL++ k+++ e++ewyfFs++dkky+tg+r+nratk+g+Wkatg+d
Sp_134920_hygk.t1 7 VPPGFRFHPTDEELVDYYLREKIAARKMC--DIIKDVDLYKIEPWDLQElcKISNeEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRD 96
69***********************9954..58**************954544442566********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
k+++s k++l+g++ktLvfykgrap+g+k+dW+mheyrle
Sp_134920_hygk.t1 97 KAIYS-KHNLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 135
*****.899*****************************85 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0048759 | Biological Process | xylem vessel member cell differentiation |
| GO:1901348 | Biological Process | positive regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MDTLSHVPPG FRFHPTDEEL VDYYLREKIA ARKMCDIIKD VDLYKIEPWD LQELCKISNE 60
EQNEWYFFSH KDKKYPTGTR TNRATKAGFW KATGRDKAIY SKHNLIGMRK TLVFYKGRAP 120
NGQKSDWIMH EYRLETNENG TPQEEGWVVC RVFKKRMATV RRLDGSPCWY DDQMSFMPDM 180
DSPRRIPHHP NNYHTPNINN SNLNFHPNQQ HNMYPCKQEL EIMPYNISHH DPYLQLPQLE 240
SPKMPQPSMQ QGYGTMLTQD YMIDSTQLDS IYGNGSGNTC GSTEQGLDDE VTDWRVLDKF 300
VASQLSQDEQ HGLSAASKGL SNYSNAPVFP ESEHMNMVIS PNSSNKEDHY ASTSNSSCQI 360
DMWK
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:16103214, PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:16103214, ECO:0000269|PubMed:25148240}. |
