PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sp_133080_xgkz.t1 | ||||||||
Common Name | SOVF_133080 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family | bZIP | ||||||||
Protein Properties | Length: 590aa MW: 64967.3 Da PI: 7.716 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.6 | 1.7e-10 | 302 | 341 | 5 | 41 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k rr+++NReAAr+sR+RKka++++Le + ++Le+e Sp_133080_xgkz.t1 302 KTLRRLAQNREAARKSRLRKKAYVQQLESsriRLAQLEQE 341 7789***********************9632255555554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.1E-8 | 295 | 345 | No hit | No description |
SMART | SM00338 | 3.1E-7 | 298 | 381 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.22 | 300 | 344 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.44E-6 | 302 | 344 | No hit | No description |
CDD | cd14708 | 1.66E-21 | 302 | 354 | No hit | No description |
Pfam | PF00170 | 9.4E-8 | 302 | 340 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 305 | 320 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 9.5E-32 | 390 | 463 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 590 aa Download sequence Send to blast |
MGFLGEVEAA AATQQDMKQL LTSGVVHPFT ASAAAAGTTT TATATTTTTP RNISTNNINN 60 KNINMSSSST SNESHHLELQ QFSLLHHHHH HHHHQHHQEP QHHQHQQQHH HSPQQHHQNI 120 SFSMMQSSPS SSSLPGNNFM GAGKESSSSA AGAYDLGELD QALFLYLDGQ TDHEQQRQNH 180 NSSSTSPPLG RGGGGGGGGG GGMRPPTLNI FPSQPMHVEP SITKASSGGV LGGGGQSTSG 240 GSKRPSEQPP PIELSNNNNI NNKSKNQHEA TAEQSKSIKR EGNRKGPTSS SEQEGPKTPD 300 PKTLRRLAQN REAARKSRLR KKAYVQQLES SRIRLAQLEQ ELQRARAQGI FFGGGGTDNG 360 IPLGVANISS DAAVFDLEYT RWLEEHHRLT CELRAAVQEH ISENELKMYV DNCLAHYDVV 420 MNLKSMVAKT DVFHLVSGMW KTPAERCFMW MGGFRPSELI KIILHQIEPL SDQQLMGICG 480 LQQSTHEAEE ALSQGLEALQ QSLSDVISSD ALSCPPNMNN YMGQMALAIN KLSTMENFVR 540 QADSLRHQTF QRLYQILTTR QAARCFLTIA EYFHRLRALS SLWMARPRQE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00491 | DAP | Transfer from AT5G06839 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021861716.1 | 0.0 | bZIP transcription factor TGA10 | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | A0A0K9QYT4 | 0.0 | A0A0K9QYT4_SPIOL; Uncharacterized protein | ||||
STRING | XP_010672705.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-176 | bZIP family protein |