PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_133080_xgkz.t1
Common NameSOVF_133080
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 590aa    MW: 64967.3 Da    PI: 7.716
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_133080_xgkz.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.61.7e-10302341541
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                        k  rr+++NReAAr+sR+RKka++++Le    + ++Le+e
  Sp_133080_xgkz.t1 302 KTLRRLAQNREAARKSRLRKKAYVQQLESsriRLAQLEQE 341
                        7789***********************9632255555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.1E-8295345No hitNo description
SMARTSM003383.1E-7298381IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.22300344IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-6302344No hitNo description
CDDcd147081.66E-21302354No hitNo description
PfamPF001709.4E-8302340IPR004827Basic-leucine zipper domain
PROSITE patternPS000360305320IPR004827Basic-leucine zipper domain
PfamPF141449.5E-32390463IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 590 aa     Download sequence    Send to blast
MGFLGEVEAA AATQQDMKQL LTSGVVHPFT ASAAAAGTTT TATATTTTTP RNISTNNINN  60
KNINMSSSST SNESHHLELQ QFSLLHHHHH HHHHQHHQEP QHHQHQQQHH HSPQQHHQNI  120
SFSMMQSSPS SSSLPGNNFM GAGKESSSSA AGAYDLGELD QALFLYLDGQ TDHEQQRQNH  180
NSSSTSPPLG RGGGGGGGGG GGMRPPTLNI FPSQPMHVEP SITKASSGGV LGGGGQSTSG  240
GSKRPSEQPP PIELSNNNNI NNKSKNQHEA TAEQSKSIKR EGNRKGPTSS SEQEGPKTPD  300
PKTLRRLAQN REAARKSRLR KKAYVQQLES SRIRLAQLEQ ELQRARAQGI FFGGGGTDNG  360
IPLGVANISS DAAVFDLEYT RWLEEHHRLT CELRAAVQEH ISENELKMYV DNCLAHYDVV  420
MNLKSMVAKT DVFHLVSGMW KTPAERCFMW MGGFRPSELI KIILHQIEPL SDQQLMGICG  480
LQQSTHEAEE ALSQGLEALQ QSLSDVISSD ALSCPPNMNN YMGQMALAIN KLSTMENFVR  540
QADSLRHQTF QRLYQILTTR QAARCFLTIA EYFHRLRALS SLWMARPRQE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021861716.10.0bZIP transcription factor TGA10
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0K9QYT40.0A0A0K9QYT4_SPIOL; Uncharacterized protein
STRINGXP_010672705.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-176bZIP family protein