PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Sp_132770_zpjm.t1 | ||||||||
Common Name | SOVF_132770 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 376aa MW: 42057.8 Da PI: 9.3456 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23 | 1.7e-07 | 242 | 280 | 17 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 A+rsR RK+++i+eLe+ v++L+ae ++ +le l+++ Sp_132770_zpjm.t1 242 AQRSRVRKLQYIAELETNVQALQAEGSEVSAQLEFLNQQ 280 89***********************99999888888776 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0014 | 231 | 290 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.59E-15 | 233 | 281 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.1E-6 | 242 | 285 | No hit | No description |
SuperFamily | SSF57959 | 8.44E-6 | 242 | 284 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 376 aa Download sequence Send to blast |
MANPKGSANF RNLMQNGKNS LLPPKSPFPS ITPSYPDYGP NTCLGSKLAS KCRDGNAYHQ 60 RTSSESVIDE QPSWLDELLN EPDTPVRKGH RRSSSDSFAY LDAASMSNID YMPVSRDESK 120 FRPMVSAPLW GSQNFDLMRE APQGSLYHDS NFYGKRNKNR ALELKLTPPN HTSGLRLSRD 180 NVIIQSTGGS SALLEANPIP VEKQDQSESG SYDLRTSSEK KDGSHAKTPS ENDTKRAKQQ 240 FAQRSRVRKL QYIAELETNV QALQAEGSEV SAQLEFLNQQ NLILSMENKA LKQRLDNLAQ 300 EKLIKYLEHE VLEREIGRLR ALYQQQQQPP PPPPQRPSSS HRRTNSRDLD SQFANLSLRP 360 KEASSGSDSF SGPVGI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_021862848.1 | 0.0 | uncharacterized protein At4g06598 | ||||
TrEMBL | A0A0K9QWP7 | 0.0 | A0A0K9QWP7_SPIOL; Uncharacterized protein | ||||
STRING | XP_010691351.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G58110.2 | 1e-102 | bZIP family protein |