PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_117840_nina.t1
Common NameSOVF_117840
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 425aa    MW: 47180.6 Da    PI: 6.6165
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_117840_nina.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.76.8e-10140180545
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                        k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Sp_117840_nina.t1 140 KSLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 180
                        788*************************9877777766555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.9E-9136199IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415138182IPR004827Basic-leucine zipper domain
CDDcd147082.11E-21140191No hitNo description
SuperFamilySSF579591.04E-6140183No hitNo description
PfamPF001706.1E-7140180IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-7141185No hitNo description
PROSITE patternPS000360143158IPR004827Basic-leucine zipper domain
PfamPF141443.6E-32223297IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MPSFIPSLPI SNSILTEGNN TSTSRISELG AFEQSLDFRI EDDVDLRNPV FSSLKSSSLT  60
VGADLQFGSF NKLSQPNLAS ASGSHRENWA ESNMADVSPR SDSSSDDTED RNLQFEAGQT  120
NTRTASDSSE RSKEKVTDQK SLRRLAQNRE AARKSRLRKK AYVQQLENSR LKLTQLEQEL  180
QRARQQGIFI SNAGDQSHAI GGNGALAFDA EYSRWLEEQN KMINELRTAV NSHASDTELH  240
TVVDNVATHF NDIFRLKGVA AKADVFHILS GMWKTPAERC FMWIGGFRPS ELLKLLVNQL  300
EPLTEQQLVG IYNLQQSSQQ AEEALSQGME ALQQSLAETL ASGTPGPSGS SGNVANYMGQ  360
MAMAMGKLGT LEGFLRQADN LRQQTLQQMH HILTTRQSAR AVLSIHDYFS RLRALSSLWL  420
ARPRD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021856713.10.0transcription factor TGA2.3-like, partial
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0K9R1810.0A0A0K9R181_SPIOL; Uncharacterized protein
STRINGXP_010673021.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-137bZIP family protein