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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sp_117630_eqqm.t1 |
| Common Name | SOVF_117630 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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| Family |
NAC |
| Protein Properties |
Length: 232aa MW: 26669.6 Da PI: 6.0335 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sp_117630_eqqm.t1 | genome | TBVR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 108.5 | 7.9e-34 | 14 | 147 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk....rknratksgyWkatgk 88
lppGfrF+Ptdeel+ +yL+ k+ g +l++ +vi+ev+ +++Pw+Lp +++e y F+kr k+++g+ r+++at+sgyW++tg+
Sp_117630_eqqm.t1 14 LPPGFRFQPTDEELLFQYLRCKIFGLPLPA-SVIPEVHFSNLDPWELPG---DSKEERYVFTKRGAKHKNGDrnhtRATKATNSGYWEETGS 101
79****************************.99***************3...456799*********9977622225566788********* PP
NAM 89 dkevlskkgel.....vglkktLvfykgrapk.gektdWvmheyrl 128
++++ +++ +g+kktLvf g++p+ ++ tdW+mhey+l
Sp_117630_eqqm.t1 102 EEHMSPPPNQNlgmpiKGVKKTLVFNIGKSPNyTSPTDWFMHEYSL 147
99999874433466669*********9988872568********97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 232 aa
Download sequence Send
to blast |
MKKHNFVIEG VSRLPPGFRF QPTDEELLFQ YLRCKIFGLP LPASVIPEVH FSNLDPWELP 60
GDSKEERYVF TKRGAKHKNG DRNHTRATKA TNSGYWEETG SEEHMSPPPN QNLGMPIKGV 120
KKTLVFNIGK SPNYTSPTDW FMHEYSLVYK NHQGTSKMED WVIYHVFLKQ RVEENDDAIM 180
LDYDNNNGHY NLTSNIDRYP CCSSSSSSSS NSFAEVSSYD SQSDEESSYN FL
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-32 | 14 | 170 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-32 | 14 | 170 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-32 | 14 | 170 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-32 | 14 | 170 | 17 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-32 | 14 | 170 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 3e-32 | 14 | 170 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 3e-32 | 14 | 170 | 20 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 3e-32 | 14 | 170 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 3e-32 | 14 | 170 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 3e-32 | 14 | 170 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 3e-32 | 14 | 170 | 20 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 3e-32 | 14 | 170 | 20 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 4e-32 | 14 | 170 | 17 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 4e-32 | 14 | 170 | 17 | 166 | NAC domain-containing protein 19 |
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