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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sp_115210_owps.t1 |
| Common Name | SOVF_115210 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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| Family |
NAC |
| Protein Properties |
Length: 288aa MW: 33181.9 Da PI: 5.9711 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sp_115210_owps.t1 | genome | TBVR | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 129.9 | 1.9e-40 | 11 | 146 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
+pGfrF Pt+eel+++yL++k++g+ ++e vi+ v iy+++PwdLp+ +++ + +ew+fF+++++++ +g r+nr t++gyWkat
Sp_115210_owps.t1 11 APGFRFYPTEEELISFYLQEKLQGRGgQDIEGVIPVVYIYDYNPWDLPQlsgercRCDPQVQEWFFFTPKQERQVKGGRPNRLTTTGYWKAT 102
59**********************997888889***************65677655555888****************************** PP
NAM 87 gkdkevlsk.kgelvglkktLvfykg..rapkgektdWvmheyr 127
g+ v+s+ +++ +g+k+t+vfy+g r+++g+kt+W m+ey
Sp_115210_owps.t1 103 GSPGYVYSSsDNKIIGVKRTMVFYHGraRSRSGSKTEWKMNEYM 146
*******9977888**********763377899**********7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 288 aa
Download sequence Send
to blast |
MGDIVDEIME APGFRFYPTE EELISFYLQE KLQGRGGQDI EGVIPVVYIY DYNPWDLPQL 60
SGERCRCDPQ VQEWFFFTPK QERQVKGGRP NRLTTTGYWK ATGSPGYVYS SSDNKIIGVK 120
RTMVFYHGRA RSRSGSKTEW KMNEYMAIDH QPSSSTNPIP SQKGEFTICR VYIKSKCLRA 180
FDRRPAAPPM NTPALLSAQQ VDHNQPSSSD QHQIQARSMV EIRRCRSSES SWSSGEEAAV 240
NNNNNNDATQ GLNNNQVNII MDMECDQQQP LWEWDDSWMN HWNLSTHY
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 9e-28 | 3 | 174 | 10 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 9e-28 | 3 | 174 | 10 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 9e-28 | 3 | 174 | 10 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 9e-28 | 3 | 174 | 10 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-27 | 3 | 174 | 13 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 1e-27 | 3 | 174 | 13 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 1e-27 | 3 | 174 | 13 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 1e-27 | 3 | 174 | 13 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 1e-27 | 3 | 174 | 13 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 1e-27 | 3 | 174 | 13 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 1e-27 | 3 | 174 | 13 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 1e-27 | 3 | 174 | 13 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 9e-28 | 3 | 174 | 10 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 9e-28 | 3 | 174 | 10 | 165 | NAC domain-containing protein 19 |
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