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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_111190_difc.t1 |
Common Name | SOVF_111190 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
bZIP |
Protein Properties |
Length: 445aa MW: 49500.8 Da PI: 6.3215 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_111190_difc.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.6 | 3.6e-10 | 156 | 193 | 4 | 41 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41
k rr+++NReAA++sR+RKka++e+Le +L +
Sp_111190_difc.t1 156 QKTLRRLAQNREAAKKSRLRKKAYVEQLESSRVKLAQL 193
5788************************9754444443 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 445 aa
Download sequence Send
to blast |
MQSFRELYCH PSDPTYFFRG EESITPNIGE LYHQVVFHQQ DAVDLSRSGL RSSNVAFPSS 60 LPFQAVNPNN YLGPSATAAT VATTRVVEAG ELVGEKRTVG GRELEYWGES ATMADTSQQT 120 DTSTDVDTDD RNQCQVIQNG AVVDSTDQSK GKTDDQKTLR RLAQNREAAK KSRLRKKAYV 180 EQLESSRVKL AQLEQQLERA RQQGFMVTGV GNEPGHSLGT NGVVAFDVHY GVWLDQHQRL 240 INDTRSALKS HVCDDELLVV VDSLMSHYDE LFRLKSIGAK SDIFHLLSGM WQTPAERCFM 300 WLGGFRSSEL LKILVNHLQP LTEQQLMGVC NLQQSSQQAE DALSQGMEAL QQSLVDTLSA 360 NCLGPCSTGI VADYMGQMAI AMGKLATLEN FVHQADLLRQ QTLQQLHRIL TTRQAAQALL 420 VIHDYTARLR ALSSLWLARP KNCNA
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF303133 | 3e-81 | KF303133.1 Beta vulgaris genotype 2_SB34_a SNP marker Bakooie genomic sequence. |
GenBank | KF303134 | 3e-81 | KF303134.1 Beta vulgaris genotype 3_SB34_b SNP marker Bakooie genomic sequence. |
GenBank | KF303135 | 3e-81 | KF303135.1 Beta vulgaris genotype 6_SB33 SNP marker Bakooie genomic sequence. |