PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Basic Information? help Back to Top

TF ID

Sp_102240_rhew.t1

Common Name

SOVF_102240

Organism

Spinacia oleracea

Taxonomic ID

3562

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia

Family

G2-like

Protein Properties

Length: 51aa MW: 5853.78 Da PI: 8.5506

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sp_102240_rhew.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	34.4	4.8e-11	23	50	1	29
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtP 29 kpr++W+ eLH++Fv av+qL G e++ P Sp_102240_rhew.t1 23 KPRVVWSVELHRKFVAAVNQL-GLENTQP 50 79*******************.7776665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.05E-5	20	48	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.2E-10	20	50	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 51 aa Download sequence Send to blast
MEQEMQSIHS QTLASFFCLA QKKPRVVWSV ELHRKFVAAV NQLGLENTQP P

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0K9R7P8	1e-29	A0A0K9R7P8_SPIOL; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	2e-11	response regulator 12