PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_102240_rhew.t1
Common NameSOVF_102240
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family G2-like
Protein Properties Length: 51aa    MW: 5853.78 Da    PI: 8.5506
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_102240_rhew.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like34.44.8e-112350129
            G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtP 29
                       kpr++W+ eLH++Fv av+qL G e++ P
  Sp_102240_rhew.t1 23 KPRVVWSVELHRKFVAAVNQL-GLENTQP 50
                       79*******************.7776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.05E-52048IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-102050IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 51 aa     Download sequence    Send to blast
MEQEMQSIHS QTLASFFCLA QKKPRVVWSV ELHRKFVAAV NQLGLENTQP P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9R7P81e-29A0A0K9R7P8_SPIOL; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.12e-11response regulator 12