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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_090720_poet.t1 |
Common Name | SOVF_090720 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
WRKY |
Protein Properties |
Length: 364aa MW: 40914.8 Da PI: 10.0795 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_090720_poet.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.5 | 9e-31 | 297 | 354 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ e+p+++++tYegeHnh
Sp_090720_poet.t1 297 DDFSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCLEEPSMLIVTYEGEHNHA 354
99************************988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005516 | Molecular Function | calmodulin binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MEIELANKVA VESGHRVLSL LCEKQDSHKL NLMAETGDAV CKFNRVISLV GKKGFGHARM 60 RRLKNLPSSL PENMLLETPH LRPESAGKPI ELLPSSENFK NSVSEIDQKV VNLPQIGQKV 120 FAEKGSIDFT LSVKLPVQNC THQNLPQNLE FLQQQQRQQF QQQMLQRVQL EQHMKYQAEM 180 MNNSSRSGGN GINLKFDGSS ICTQTMSSNR SFVSSLSMDG SVTNLSQNSF QLFGLPQSSD 240 PNSQHLIRKR CLVKDEGGSL KCGSGSKCHC SKRRKLRVKR SIKVPAISNK NADIPPDDFS 300 WRKYGQKPIK GSPHPRGYYK CSSVRGCPAR KHVERCLEEP SMLIVTYEGE HNHAKFIASH 360 SWQT
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |