PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_086720_jmtc.t1
Common NameSOVF_086720
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 517aa    MW: 57601.5 Da    PI: 8.6478
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_086720_jmtc.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.2e-10210242436
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvk 36 
                         k  rr+++NReAAr+sR+RKka++++Le    
  Sp_086720_jmtc.t1 210 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRI 242
                        6889************************97544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.3E-6207286IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.6E-7209253No hitNo description
PROSITE profilePS502179.14209253IPR004827Basic-leucine zipper domain
PfamPF001701.7E-7210249IPR004827Basic-leucine zipper domain
CDDcd147082.51E-21211257No hitNo description
SuperFamilySSF579592.0E-6211253No hitNo description
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
PfamPF141444.7E-31294369IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 517 aa     Download sequence    Send to blast
MASSHRLGET GLSQSGPSSN HHNIPFAIPP HHHHHHHHLH GINPNTTTNP FMNQGGPSFD  60
FGELEQAIVL QGVKIGHHDQ PKPSLFTNGS RPAATLEMFP SWPMRIQQTT RGSCSKSGGE  120
STDDSGSGIN TLSSSQADTH LEQPESPISR NQQQQQQHQH LQGGSFQQQQ QPVMATDSSN  180
RTGLSQNPSA LKQPQEKRHG GTKSNKPLDA KTLRRLAQNR EAARKSRLRK KAYVQQLESS  240
RIKLAQLEQD LQRARAQGFF MGGGGAGGAP SNMSSGAAIF DMEYARWLED DHRHTSELRG  300
ALHAHLSDGD LRIIVDAYIN HYDDIFRLKG VAAKSDIFHL ITGMWTTPAE RCFLWMGGFR  360
PSELIKMLTA QLDPLTEQQL MGIYSLQHSS QQAEEALTQG LDQLQQSLVD TIATSTVTDG  420
MHQMAIALGK LSNLEGFIRQ ADNLRQQTLH QLRRILTIRQ AARCFLVIGE YYGRLRALSS  480
LWASRPREHM MNNDNSCQTA PDMQMVQPPH HNHFSPF
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021858653.10.0transcription factor TGA9 isoform X2
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A0K9RCX90.0A0A0K9RCX9_SPIOL; Uncharacterized protein
STRINGXP_010686011.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]