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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sp_082500_zhpm.t1 | ||||||||
Common Name | SOVF_082500 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family | Dof | ||||||||
Protein Properties | Length: 119aa MW: 11727.9 Da PI: 6.7662 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 28 | 4.5e-09 | 55 | 82 | 7 | 34 |
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCk 34 cp Cds++ + nyslsqPryfC Sp_082500_zhpm.t1 55 LCPSCDSADKQVLLSQNYSLSQPRYFCS 82 6**************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-4 | 53 | 82 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.7E-6 | 55 | 82 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence Send to blast |
LLGDGGGSGG GGAGGGGGGA GAGAGGGEDK HSEWQGQDAG GGRDDGHDNN SLPHLCPSCD 60 SADKQVLLSQ NYSLSQPRYF CSPVGAVGGT GLKVVPTVTS LLVLVAVRTN APRWRLSRI |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9RCD8 | 2e-77 | A0A0K9RCD8_SPIOL; Uncharacterized protein (Fragment) |