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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sp_080250_frhe.t1 |
Common Name | SOVF_080250 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family |
WRKY |
Protein Properties |
Length: 292aa MW: 31944.2 Da PI: 5.9981 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sp_080250_frhe.t1 | genome | TBVR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96.6 | 1.7e-30 | 79 | 137 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dpk+++itY eHnh
Sp_080250_frhe.t1 79 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRVDPKMLIITYACEHNHA 137
69*************************998****************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MVMDNRHRMS SYVSHEQDDP QSSSENGAPD SPFSGDDSRA TATAPSPKKS RRSIQKRVVS 60 IPIGDVDGSR SKGESYPPSD SWAWRKYGQK PIKGSPYPRG YYRCSSSKGC PARKQVERSR 120 VDPKMLIITY ACEHNHALPT TKHHHHHHNN HNQTPPPSNA VTSSVPSPET PPASITPSDS 180 TEDGSEEPSP SPSSPLHMNP FGDPPHLEFV GDTLMLGNIG IEYNWISDLS FYTPALVGPK 240 CDDTDVATFP MKEEDESLFG DLDELPECSL VFRHAQGSID TCTTATPICG ST
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT144536 | 1e-39 | BT144536.1 Medicago truncatula clone JCVI-FLMt-4P21 unknown mRNA. |