PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sp_071390_ugwc.t1 | ||||||||
Common Name | SOVF_071390 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
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Family | bZIP | ||||||||
Protein Properties | Length: 508aa MW: 55665.9 Da PI: 7.8386 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.9 | 2.2e-08 | 186 | 247 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 eke +r rr NRe+Ar +R++a eeL++k++ L +eN++Lk e ke ++l++ Sp_071390_ugwc.t1 186 EKEARRIRRILANRESARQTIRRRQAFHEELTRKAADLASENETLKRSKELAVKEFQSLQTT 247 799*******************************************8888888888888765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 1.3E-7 | 186 | 248 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 4.4E-8 | 186 | 250 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.634 | 188 | 251 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.24E-5 | 190 | 245 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.0E-6 | 190 | 257 | No hit | No description |
CDD | cd14702 | 2.74E-11 | 191 | 242 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 508 aa Download sequence Send to blast |
MMMSSSNNGE SSGSSASSAG GGEFEIAKVL ASLRKHDNAA AAVAVEVEVE VEKEMRGTTG 60 GGAKSTDSVG QDDNNNNNNN NNNNNNNNNS NGWGSKGKRW LSSSGGNYNK RVKECSSIHS 120 SSPLPFDLNV DQPSVYQEEC QNVDAKTEET CESAERGRVC NSPHNGGRSR HNLTEVFDRG 180 QDIMAEKEAR RIRRILANRE SARQTIRRRQ AFHEELTRKA ADLASENETL KRSKELAVKE 240 FQSLQTTNQN LKGQLSQTLG CKLGENKEEA QSSSPDTHNL NSANWAQLMY NKLSAGSFVF 300 PACVSPSDLN VSTLSQQLYS SRMSENTSSI NGQNMPWCIL PCPVFLPIPD IKNFPSLLLK 360 DKDEVSSVDS IHAHAHAHSP SSVLHCLHNC PLVRSADKVS RGLPLTQDNC INGFHQTPFG 420 ISIAGVNQQI APQLRDGFSV DGEDCIIPHS LNNTDTCSAT VLETPSALPE KRKERTLRKK 480 ESTVAGAEAR KKRKELMKLK SRLHCHLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 227 | 232 | ETLKRS |
2 | 477 | 493 | RKKESTVAGAEARKKRK |
3 | 489 | 494 | RKKRKE |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021861461.1 | 0.0 | probable basic-leucine zipper transcription factor F | ||||
TrEMBL | A0A0K9RHP3 | 0.0 | A0A0K9RHP3_SPIOL; Uncharacterized protein | ||||
STRING | XP_010683778.1 | 1e-151 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 5e-31 | bZIP family protein |