PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sp_071390_ugwc.t1
Common NameSOVF_071390
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Family bZIP
Protein Properties Length: 508aa    MW: 55665.9 Da    PI: 7.8386
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sp_071390_ugwc.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.92.2e-08186247162
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                        eke +r rr   NRe+Ar   +R++a  eeL++k++ L +eN++Lk   e   ke ++l++ 
  Sp_071390_ugwc.t1 186 EKEARRIRRILANRESARQTIRRRQAFHEELTRKAADLASENETLKRSKELAVKEFQSLQTT 247
                        799*******************************************8888888888888765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001701.3E-7186248IPR004827Basic-leucine zipper domain
SMARTSM003384.4E-8186250IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.634188251IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.24E-5190245No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-6190257No hitNo description
CDDcd147022.74E-11191242No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    Send to blast
MMMSSSNNGE SSGSSASSAG GGEFEIAKVL ASLRKHDNAA AAVAVEVEVE VEKEMRGTTG  60
GGAKSTDSVG QDDNNNNNNN NNNNNNNNNS NGWGSKGKRW LSSSGGNYNK RVKECSSIHS  120
SSPLPFDLNV DQPSVYQEEC QNVDAKTEET CESAERGRVC NSPHNGGRSR HNLTEVFDRG  180
QDIMAEKEAR RIRRILANRE SARQTIRRRQ AFHEELTRKA ADLASENETL KRSKELAVKE  240
FQSLQTTNQN LKGQLSQTLG CKLGENKEEA QSSSPDTHNL NSANWAQLMY NKLSAGSFVF  300
PACVSPSDLN VSTLSQQLYS SRMSENTSSI NGQNMPWCIL PCPVFLPIPD IKNFPSLLLK  360
DKDEVSSVDS IHAHAHAHSP SSVLHCLHNC PLVRSADKVS RGLPLTQDNC INGFHQTPFG  420
ISIAGVNQQI APQLRDGFSV DGEDCIIPHS LNNTDTCSAT VLETPSALPE KRKERTLRKK  480
ESTVAGAEAR KKRKELMKLK SRLHCHLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227232ETLKRS
2477493RKKESTVAGAEARKKRK
3489494RKKRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021861461.10.0probable basic-leucine zipper transcription factor F
TrEMBLA0A0K9RHP30.0A0A0K9RHP3_SPIOL; Uncharacterized protein
STRINGXP_010683778.11e-151(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.15e-31bZIP family protein