 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sp_068500_rmfu.t2 |
| Common Name | SOVF_068500 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
|
| Family |
NAC |
| Protein Properties |
Length: 347aa MW: 38276.3 Da PI: 9.4572 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sp_068500_rmfu.t2 | genome | TBVR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 93.7 | 3e-29 | 27 | 102 | 52 | 128 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s +++++g+k+tLvf+ grapkge+t+W+mhey +
Sp_068500_rmfu.t2 27 INSDQEWFFFSPRGKKYPNGSQSKRATQIGYWKATGKERAVKS-GSNVIGTKRTLVFHIGRAPKGERTEWIMHEYCM 102
35689*************************************9.99*****************************86 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009626 | Biological Process | plant-type hypersensitive response |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0034976 | Biological Process | response to endoplasmic reticulum stress |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0071333 | Biological Process | cellular response to glucose stimulus |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005783 | Cellular Component | endoplasmic reticulum |
| GO:0016021 | Cellular Component | integral component of membrane |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MALTNVLKSS LKLTSASSSP GTCLAIINSD QEWFFFSPRG KKYPNGSQSK RATQIGYWKA 60
TGKERAVKSG SNVIGTKRTL VFHIGRAPKG ERTEWIMHEY CMSGKAQDAL VVCRLRRKSD 120
YQAMNGGPNG EIQSPDPSSL MASSGTYSGC GIMELINTSA RDKLVAECSF KKSSSSHDSH 180
SVEQMDSASQ SDWKAKDEII QPESTSNNHV GNEDDLFAEI LNDSIIQLDE CLPPATIGVQ 240
SIVTNNTTVP IVPHLHNNPP HQSNVQRVHP SQGTANRRIR LRKLRRFSPC KDELEESLGE 300
NTVSSKPKQL TKGRGWARVL NNYARLYVVV ITMALVILAY TTAPAYY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-24 | 27 | 118 | 67 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-24 | 27 | 118 | 67 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-24 | 27 | 118 | 67 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-24 | 27 | 118 | 67 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-24 | 27 | 118 | 70 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 1e-24 | 27 | 118 | 70 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 1e-24 | 27 | 118 | 70 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 1e-24 | 27 | 118 | 70 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 1e-24 | 27 | 118 | 70 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 1e-24 | 27 | 118 | 70 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 1e-24 | 27 | 118 | 70 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 1e-24 | 27 | 118 | 70 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 1e-24 | 27 | 118 | 67 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 1e-24 | 27 | 118 | 67 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
